GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM409466
Query DataSets for GSM409466
Status
Public on Jul 01, 2009
Title
pcDNA3(CT3)
Sample type
RNA
Source name
Human cell line
Organism
Homo sapiens
Characteristics
cell line: HeLa
Extracted molecule
total RNA
Extraction protocol
Total RNA was obtained using the RNeasy kit (Quiagen) according to the manufacturer’s instructions.
Label
biotin
Label protocol
standard Affymetrix protocol
Hybridization protocol
standard Affymetrix protocol
Scan protocol
standard Affymetrix protocol
Description
in situ oligonucleotide
Data processing
Analysis by RMA.
Submission date
May 28, 2009
Last update date
May 28, 2009
Contact name
Marco Sardiello
E-mail(s)
[email protected]
Organization name
Baylor College of Medicine
Department
MHG
Street address
One Baylor Plaza
City
Houston
State/province
TX
ZIP/Postal code
77030
Country
USA
Platform ID
GPL6244
Series (1)
GSE16267
Profiling gene expression in HeLa cells following TFEB transient transfection
Data table header descriptions
ID_REF
VALUE
rma normalized
Data table
ID_REF
VALUE
7892501
3.506422885
7892502
15.67072476
7892503
2.602683711
7892504
304.4370214
7892505
6.02098699
7892506
7.361501205
7892507
6.821079134
7892508
9.646462622
7892509
1217.748086
7892510
3.530811985
7892511
2.566851795
7892512
248.9996665
7892513
2.732080514
7892514
564.1754193
7892515
308.6868039
7892516
3.944930818
7892517
5.897076869
7892518
4.691339797
7892519
18.25221945
7892520
390.7223575
Total number of rows:
33297
Table truncated, full table size
643 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM409466_CT3.CEL.gz
3.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
