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Sample GSM40965

Query DataSets for GSM40965

Status

Public on Feb 04, 2006

Title

Control_spikenormalized

Sample type

RNA

Source name

HT1080 fibrosarcoma

Organism

Homo sapiens

Extracted molecule

total RNA

Description

HT1080 fibrosarcoma cells were treated with cytostatic drugs and analysed on Affymetrix microarray to identify genes and pathways regulated by these compounds. This entry corresponds to untreated control cells. The array image was processed using Affymetrix MAS 5.0 software and normalized to a mask file representing polyA+ spike controls.
Keywords = Cytostatic drugs
Keywords = apoptosis

Submission date

Feb 03, 2005

Last update date

May 29, 2005

Contact name

Ludger Klein-Hitpass

E-mail(s)

[email protected]

Phone

+49 201 723 85552

Organization name

Institut fuer Zellbiologie

Department

Universitaetsklinikum

Lab

BioChip Lab

Street address

Virchowstr. 173

City

Essen

ZIP/Postal code

D-45122

Country

Germany

Platform ID

GPL96

Series (1)

GSE2238

Targets of cytostatic drugs in HT1080 fibrosarcoma

Data table header descriptions
ID_REF
VALUE	'Signal, a measure of the abundance of the transcript
ABS_CALL	the call in an absolute analysis that indicates whether a transcript is reliably detected (Present, P) or not detected (Absent, A)
DETECTION P-VALUE	p-value that indicates the significance level of the detection (ABS_CALL) call

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
41047_at	231.9	P	0.001354
210870_s_at	33.7	P	0.010742
215295_at	36.2	P	0.046143
208101_s_at	129.1	P	0.001221
216655_s_at	4.2	A	0.665527
208441_at	32.8	A	0.080566
205244_s_at	3.3	A	0.989258
203892_at	38.3	P	0.010742
201985_at	130.5	P	0.001221
211490_at	4.3	A	0.753906
220753_s_at	97	P	0.023926
202169_s_at	493.7	P	0.000244
201905_s_at	6.7	A	0.398926
207973_x_at	35.5	P	0.030273
217947_at	1692.6	P	0.000244
209527_at	125.9	P	0.037598
202629_at	204.8	P	0.000732
216083_s_at	7.5	A	0.533936
204490_s_at	1648.8	P	0.000244
216020_at	1.7	A	0.533936

Total number of rows: 22283

Table truncated, full table size 581 Kbytes.

Supplementary data files not provided