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Sample GSM41408 Query DataSets for GSM41408
Status Public on Apr 12, 2005
Title MIN6 growth at 5.5 mM of glucose and treated at 20 uM of amylin during 2h
Sample type RNA
 
Source name MIN6, 5.5 mM of glucose,treated at 20 uM of amylin during 2h
Organism Mus musculus
Treatment protocol Treated at 20 uM of amylin during 2h
Growth protocol Murine pancreatic beta cell line MIN6 was growth at 5.5 mM of glucose, 37 ºC, 5% CO2
Extracted molecule total RNA
Extraction protocol According to the protocol enclosed with the RNeasy Mini Kit (Qiagen, Hilden, Germany)
Label protocol According to Affymetrix protocol (biotin)
 
Hybridization protocol According to Affymetrix protocol (biotin labeled cRNA)
Scan protocol According to Affymetrix protocol
Description Murine pancreatic beta cell line MIN6 was growth at 5.5 mM of glucose, 37 ºC, 5% CO2 and was treated at 20 uM of human amylin during 2h
Data processing Raw data was background adjusted, normalized and summarized by RMA (Affy package version 1.12.2, R version 2.4.0)
 
Submission date Feb 08, 2005
Last update date Feb 01, 2007
Contact name Silvia Casas Fontdevila
E-mail(s) [email protected]
Phone 0034932275400-2910
Fax 0034934515272
URL http://www.idibaps.ub.edu/eng/home.php
Organization name IDIBAPS
Lab Laboratory of Experimental Diabetes
Street address Villarroel, 170
City Barcelona
ZIP/Postal code 08036
Country Spain
 
Platform ID GPL339
Series (1)
GSE2253 Beta cells (MIN6) treated with amylin at different times and doses and growth at different concentrations of glucose

Data table header descriptions
ID_REF
VALUE Raw data was background adjusted, normalized and summarized by RMA (Affy package version 1.12.2, R version 2.4.0)

Data table
ID_REF VALUE
1415670_at 10.11307487
1415671_at 10.49842372
1415672_at 9.579530851
1415673_at 8.7780761
1415674_a_at 8.601376741
1415675_at 9.071342487
1415676_a_at 10.82054513
1415677_at 8.500059612
1415678_at 9.769714504
1415679_at 10.81143674
1415680_at 8.164498933
1415681_at 8.895070534
1415682_at 8.276362006
1415683_at 9.953677778
1415684_at 7.389924064
1415685_at 7.759742646
1415686_at 9.230540954
1415687_a_at 11.49466873
1415688_at 8.686299945
1415689_s_at 7.925221218

Total number of rows: 22690

Table truncated, full table size 521 Kbytes.




Supplementary file Size Download File type/resource
GSM41408.CEL.gz 3.5 Mb (ftp)(http) CEL
GSM41408.EXP.gz 480 b (ftp)(http) EXP

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