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Sample GSM41790 Query DataSets for GSM41790
Status Public on Feb 28, 2005
Title WT_Glu_N2_0.04_Generations_Rep_3
Sample type RNA
 
Channel 1
Source name WT_Glu_N2_0.04_Generations_Rep_3
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
Channel 2
Source name WT_Gal_N2_Reference
Organism Saccharomyces cerevisiae
Extracted molecule total RNA
 
 
Description Sparged, fermentor clutures of a yeast strain (JM43) were aerobically grown on glucose medium (SSD-TEA). At time zero (generation 0) the saprge gas was switched from air to O2-free N2 and samples were harvested at 0.04 generations of anaerobic growth. 30 µg of total RNA was reverse transcribed (Cy3) and hybridized against a reference (Cy5) under the same gas condition, which consisted of a pool of equal masses of RNA from each time point sampled. The data are background-corrected and normalized.
 
Submission date Feb 10, 2005
Last update date Aug 22, 2008
Contact name Kurt E Kwast
E-mail(s) [email protected]
Phone 217-244-3122
Organization name University of Illinois at Urbana-Champaign
Department Molecular & Integrative Physiology
Lab Kwast Lab
Street address 407 S. Goodwin Ave.
City Urbana
State/province IL
ZIP/Postal code 61801
Country USA
 
Platform ID GPL1535
Series (4)
GSE1879 aerobic_to_anaerobic_shift
GSE2267 JM43_Glucose_Air_N2_Air_Shift
GSE3705 JM43 cells grown aerobically in galactose and treated with Antimycin A

Data table header descriptions
ID_REF
VALUE log2 Ratio

Data table
ID_REF VALUE
Q0045 0.494929812
Q0050 0.455327149
Q0055 0.215709552
Q0060 0.740499465
Q0065 0.621596246
Q0070 0.654624986
Q0075 0.209508931
Q0080 0.655008006
Q0085 -0.55457762
Q0105 0.362845673
Q0110 -1.293125267
Q0115 0.439584646
Q0120 0.603019397
Q0130 0.904801223
Q0140 0.406048961
Q0160 0.24596518
Q0250 0.148614739
Q0255 -0.679262532
Q0275 0.388131685
YAL001C -0.075986759

Total number of rows: 5617

Table truncated, full table size 111 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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