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Sample GSM425124 Query DataSets for GSM425124
Status Public on Sep 29, 2011
Title UHRR-22
Sample type RNA
 
Source name Stratagene Universal Human Reference RNA (Catalog #740000)
Organism Homo sapiens
Characteristics sample type: Reference RNA
Extracted molecule total RNA
Extraction protocol Statagene Universal Reference RNA
Label Biotin
Label protocol 250 ng of total RNA were converted to cDNA, followed by an in vitro transcription amplification step to generate biotin-labeled cRNA using the Ambion Illumina TotalPrep RNA Amplification Kit (Applied Biosystems, Austin, TX).
 
Hybridization protocol 750 ng of labeled cRNA were applied to Illimuna whole-genome gene expression HumanRef-8 v2 BeadChips for a overnight hybridization at 58°C.
Scan protocol Signal is developed with streptavidin-Cy3 and the BeadChip is scanned with the Illumina BeadArray Reader.
Description replicate 22
Data processing Image data were processed by BeadStudio software using background subtraction and Quantile normalization.
 
Submission date Jul 07, 2009
Last update date Sep 29, 2011
Contact name Dong-Yu Wang
Organization name UHN-PMH-OCI
Street address 610 University Ave
City Toronto
ZIP/Postal code M5G 2M9
Country Canada
 
Platform ID GPL6104
Series (1)
GSE16984 Comparability and concordance of replicated microarray data.

Data table header descriptions
ID_REF
VALUE Quantile normalized

Data table
ID_REF VALUE
ILMN_1343291 51430.52
ILMN_1343292 5326.456
ILMN_1343293 17012.7
ILMN_1343294 47137.95
ILMN_1651209 72.73085
ILMN_1651217 28.30656
ILMN_1651228 21854.14
ILMN_1651229 322.9791
ILMN_1651234 -6.101251
ILMN_1651235 28.52363
ILMN_1651236 24.89599
ILMN_1651237 3648.752
ILMN_1651238 1.270633
ILMN_1651254 5918.833
ILMN_1651259 32.60211
ILMN_1651260 -16.08386
ILMN_1651261 367.9063
ILMN_1651262 14886.44
ILMN_1651268 11.81099
ILMN_1651278 1396.159

Total number of rows: 22184

Table truncated, full table size 477 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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