|
| Status |
Public on Mar 15, 2010 |
| Title |
adult_Malignant germ cell tumor_Seminoma-12 [mRNA] |
| Sample type |
RNA |
| |
|
| Source name |
Seminoma replicate 12 of 12
|
| Organism |
Homo sapiens |
| Characteristics |
tumor composition: Pure
anatomical site: Testis
gender: Male
developmental stage: adult
|
| Treatment protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| Growth protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| Extracted molecule |
total RNA |
| Extraction protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| Label |
biotin
|
| Label protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| |
|
| Hybridization protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| Scan protocol |
As per published paper: Korkola et al, Cancer Research 2006:66;820-7; PMID 16424014
|
| Description |
GEO reference number: GSM72485
|
| Data processing |
Pre-processing of microarray .cel (CEL) files (including background correction and normalization) was performed using the Bioconductor package Robust Multi-Array Average (RMA) in the statistical software environment R.
|
| |
|
| Submission date |
Oct 17, 2009 |
| Last update date |
Mar 11, 2010 |
| Contact name |
Matthew Jonathan Murray |
| E-mail(s) |
[email protected]
|
| Phone |
07976413769
|
| Organization name |
MRC Cancer Cell Unit
|
| Department |
MRC/Hutchison Research Centre
|
| Lab |
2.5
|
| Street address |
Box 197, Hills Road
|
| City |
Cambridge |
| ZIP/Postal code |
CB2 0XZ |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE18155 |
Malignant Germ Cell Tumors Display Common microRNA Profiles Resulting in Global Changes in Expression of mRNA Targets |
|
| Relations |
| Reanalysis of |
GSM72485 |
