GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM46814
Query DataSets for GSM46814
Status
Public on Mar 31, 2005
Title
Omentum - 1003
Sample type
RNA
Source name
Omentum
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.3
Patient Age: 80-90
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 1
Presenting Symptoms: Abdominal mass
Presenting Symptoms: Abdominal pain
Presenting Symptoms: Bloating
Pathological T: 3c
Pathological N: 0
Pathological M: 0
Pathological Stage: 3C
Pathological Grade: 3
Primary Site: Ovary
Histology: Metastatic Papillary Serous Adenocarcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
638.6
P
0.00034
AFFX-BioB-M_at
922.6
P
4.4e-005
AFFX-BioB-3_at
554
P
9.5e-005
AFFX-BioC-5_at
1674.6
P
4.4e-005
AFFX-BioC-3_at
2129.9
P
4.4e-005
AFFX-BioDn-5_at
5041.7
P
4.4e-005
AFFX-BioDn-3_at
8657
P
4.4e-005
AFFX-CreX-5_at
20604
P
4.4e-005
AFFX-CreX-3_at
25533.7
P
4.4e-005
AFFX-DapX-5_at
25.6
A
0.250796
AFFX-DapX-M_at
41.9
A
0.425962
AFFX-DapX-3_at
87.8
P
0.002867
AFFX-LysX-5_at
36.8
A
0.108979
AFFX-LysX-M_at
20.5
A
0.699394
AFFX-LysX-3_at
36.3
A
0.102165
AFFX-PheX-5_at
5.1
A
0.876428
AFFX-PheX-M_at
15.3
A
0.686277
AFFX-PheX-3_at
23.6
A
0.52976
AFFX-ThrX-5_at
7.8
A
0.712257
AFFX-ThrX-M_at
5.7
A
0.60308
Total number of rows:
54675
Table truncated, full table size
1439 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46814.CEL.gz
8.1 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
