GEO Accession viewer

NCBI > GEO > Accession Display

Not logged in | Login

GEO help: Mouse over screen elements for information.

Sample GSM46818

Query DataSets for GSM46818

Status

Public on Mar 31, 2005

Title

Omentum - 1022

Sample type

RNA

Source name

Omentum

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.5
Patient Age: 40-50
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: Yes
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 15
Primary Site: Pelvic peritoneum
Histology: Metastatic Endometrial Stromal Sarcoma

Submission date

Mar 31, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

[email protected]

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	999.8	P	0.000754
AFFX-BioB-M_at	1316.2	P	4.4e-005
AFFX-BioB-3_at	875.4	P	5.2e-005
AFFX-BioC-5_at	2528.9	P	5.2e-005
AFFX-BioC-3_at	3799.2	P	4.4e-005
AFFX-BioDn-5_at	7286.6	P	4.4e-005
AFFX-BioDn-3_at	11621.2	P	4.4e-005
AFFX-CreX-5_at	31624.9	P	5.2e-005
AFFX-CreX-3_at	35151.1	P	4.4e-005
AFFX-DapX-5_at	66.7	A	0.139482
AFFX-DapX-M_at	50.6	A	0.60308
AFFX-DapX-3_at	67.9	A	0.354453
AFFX-LysX-5_at	50.7	A	0.227636
AFFX-LysX-M_at	5.8	A	0.824672
AFFX-LysX-3_at	52.7	A	0.139482
AFFX-PheX-5_at	9.5	A	0.772364
AFFX-PheX-M_at	3	A	0.993129
AFFX-PheX-3_at	58.5	A	0.559354
AFFX-ThrX-5_at	11.3	A	0.876428
AFFX-ThrX-M_at	3.6	A	0.988616

Total number of rows: 54675

Table truncated, full table size 1450 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM46818.CEL.gz	8.3 Mb	(ftp)(http)	CEL
Processed data included within Sample table