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GEO accession:
Sample GSM46828
Query DataSets for GSM46828
Status
Public on Mar 31, 2005
Title
Liver or Omentum - 1308
Sample type
RNA
Source name
Liver or Omentum
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.4
Patient Age: 30-40
Gender: Female
Ethnic Background: American Indian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: No
Prior Therapy: Chemotherapy
Prior Therapy: Surgical
Pathological T: 3
Pathological N: 2
Pathological M: 1
Pathological Metastatic Sites: Hepatic
Pathological Stage: 4
Pathological Grade: 3
Primary Site: Colon
Histology: Metastatic Adenocarcinoma
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
579
P
0.00039
AFFX-BioB-M_at
834.3
P
4.4e-005
AFFX-BioB-3_at
402.8
P
0.000127
AFFX-BioC-5_at
1514.2
P
4.4e-005
AFFX-BioC-3_at
2242.2
P
4.4e-005
AFFX-BioDn-5_at
4093.8
P
4.4e-005
AFFX-BioDn-3_at
8600.8
P
5.2e-005
AFFX-CreX-5_at
17946.3
P
5.2e-005
AFFX-CreX-3_at
22646.1
P
4.4e-005
AFFX-DapX-5_at
15.5
A
0.440646
AFFX-DapX-M_at
33.6
A
0.559354
AFFX-DapX-3_at
7.1
A
0.883908
AFFX-LysX-5_at
16.7
A
0.425962
AFFX-LysX-M_at
51.8
A
0.262827
AFFX-LysX-3_at
29.6
A
0.16584
AFFX-PheX-5_at
3
A
0.966323
AFFX-PheX-M_at
2.1
A
0.995002
AFFX-PheX-3_at
12.4
A
0.672921
AFFX-ThrX-5_at
18.1
A
0.672921
AFFX-ThrX-M_at
2.5
A
0.990663
Total number of rows:
54675
Table truncated, full table size
1441 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46828.CEL.gz
8.2 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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