NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM46845 Query DataSets for GSM46845
Status Public on Mar 31, 2005
Title Colon - 2049
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 2.01
Patient Age: 70-80
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 26-30
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: Yes
Family History of Cancer?: No
Screening studies performed?: No
Diagnosis made by: Sigmoidoscopy
Primary Site: Colon
Histology: Adenocarcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) [email protected]
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 345.7 P 0.000754
AFFX-BioB-M_at 469.6 P 0.000095
AFFX-BioB-3_at 329 P 0.001248
AFFX-BioC-5_at 1230.1 P 0.00006
AFFX-BioC-3_at 1549.9 P 0.000044
AFFX-BioDn-5_at 2700.5 P 0.000044
AFFX-BioDn-3_at 7186.5 P 0.00007
AFFX-CreX-5_at 13387.4 P 0.000052
AFFX-CreX-3_at 20938.4 P 0.000044
AFFX-DapX-5_at 1403 P 0.000052
AFFX-DapX-M_at 2598 P 0.000509
AFFX-DapX-3_at 3141.7 P 0.000052
AFFX-LysX-5_at 195.7 P 0.000147
AFFX-LysX-M_at 310.6 P 0.004998
AFFX-LysX-3_at 457.6 P 0.00011
AFFX-PheX-5_at 261.4 P 0.00007
AFFX-PheX-M_at 417.7 P 0.000127
AFFX-PheX-3_at 361.6 P 0.000147
AFFX-ThrX-5_at 409.5 P 0.00011
AFFX-ThrX-M_at 752.3 P 0.00007

Total number of rows: 54675

Table truncated, full table size 1445 Kbytes.




Supplementary file Size Download File type/resource
GSM46845.CEL.gz 8.3 Mb (ftp)(http) CEL
Processed data included within Sample table
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap