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Sample GSM46869

Query DataSets for GSM46869

Status

Public on Mar 31, 2005

Title

Breast - 22259

Sample type

RNA

Source name

Breast

Organism

Homo sapiens

Extracted molecule

total RNA

Description

Quality metric = 28S to 18S: 1.69
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : No
Alcohol Consumption?: No
Family History of Cancer?: No
Mammogram: Yes
Number of years in which a mammogram was obtained?: 0-5
Oral contraceptives?: No
Oophorectomy?: No
Fibrocystic disease?: No
Mammogram calcifications?: No
Primary Site: Breast
Histology: Ductal Carcinoma

Submission date

Mar 31, 2005

Last update date

Aug 28, 2018

Contact name

Erin Curley

E-mail(s)

[email protected]

Phone

602-343-8808

Fax

602-343-8440

URL

http://www.intgen.org

Organization name

IGC

Department

Lab

expO

Street address

445 N. 5th Street

City

Phoenix

State/province

ZIP/Postal code

85004

Country

USA

Platform ID

GPL570

Series (1)

GSE2109

Expression Project for Oncology (expO)

Relations

Reanalyzed by

GSE64985

Reanalyzed by

GSE119087

Data table header descriptions
ID_REF	The name of the probe set, blank for control probes
VALUE	The signal value calculated by MAS5, normalized
ABS_CALL	The detection value calculated by the MAS5
DETECTION P-VALUE	The detection p-value calculated by the MAS5

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-BioB-5_at	933.5	P	0.000225
AFFX-BioB-M_at	1402.2	P	4.4e-005
AFFX-BioB-3_at	760.1	P	4.4e-005
AFFX-BioC-5_at	2536.6	P	4.4e-005
AFFX-BioC-3_at	3116.3	P	4.4e-005
AFFX-BioDn-5_at	6494.3	P	4.4e-005
AFFX-BioDn-3_at	10976.8	P	4.4e-005
AFFX-CreX-5_at	26124.6	P	5.2e-005
AFFX-CreX-3_at	33219.4	P	4.4e-005
AFFX-DapX-5_at	853.8	P	6e-005
AFFX-DapX-M_at	1805.9	P	0.000662
AFFX-DapX-3_at	2721.8	P	5.2e-005
AFFX-LysX-5_at	168.9	P	0.000662
AFFX-LysX-M_at	279.7	P	0.008436
AFFX-LysX-3_at	524.5	P	9.5e-005
AFFX-PheX-5_at	153.1	P	0.000225
AFFX-PheX-M_at	268.7	P	0.000857
AFFX-PheX-3_at	442.7	P	0.00141
AFFX-ThrX-5_at	240.9	P	0.000581
AFFX-ThrX-M_at	405.2	P	0.000127

Total number of rows: 54675

Table truncated, full table size 1447 Kbytes.

Supplementary file	Size	Download	File type/resource
GSM46869.CEL.gz	8.2 Mb	(ftp)(http)	CEL
Processed data included within Sample table