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GEO accession:
Sample GSM46886
Query DataSets for GSM46886
Status
Public on Mar 31, 2005
Title
Ovary - 23904
Sample type
RNA
Source name
Ovary
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Quality metric = 28S to 18S: 1.5
Patient Age: 50-60
Gender: Female
Ethnic Background: Caucasian
Tobacco Use : Yes
Years of Tobacco Use: 6-10
Type of Tobacco Use: Cigarettes
Alcohol Consumption?: No
Family History of Cancer?: Yes
Days from Patient Diagnosis to Excision: 1
Presenting Symptoms: Abdominal mass
Presenting Symptoms: Abdominal pain
Pathological T: 3a
Pathological N: 1
Pathological M: 0
Pathological Stage: 3C
Pathological Grade: 1
Primary Site: Ovary
Histology: Benign serous cystadenoma of borderline malignancy
Submission date
Mar 31, 2005
Last update date
Aug 28, 2018
Contact name
Erin Curley
E-mail(s)
[email protected]
Phone
602-343-8808
Fax
602-343-8440
URL
http://www.intgen.org
Organization name
IGC
Department
Lab
expO
Street address
445 N. 5th Street
City
Phoenix
State/province
AZ
ZIP/Postal code
85004
Country
USA
Platform ID
GPL570
Series (1)
GSE2109
Expression Project for Oncology (expO)
Relations
Reanalyzed by
GSE64985
Reanalyzed by
GSE119087
Data table header descriptions
ID_REF
The name of the probe set, blank for control probes
VALUE
The signal value calculated by MAS5, normalized
ABS_CALL
The detection value calculated by the MAS5
DETECTION P-VALUE
The detection p-value calculated by the MAS5
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
349.7
P
0.000662
AFFX-BioB-M_at
449.7
P
6e-005
AFFX-BioB-3_at
285.8
P
0.000972
AFFX-BioC-5_at
1031.7
P
4.4e-005
AFFX-BioC-3_at
1341.9
P
4.4e-005
AFFX-BioDn-5_at
2555.3
P
5.2e-005
AFFX-BioDn-3_at
5172
P
9.5e-005
AFFX-CreX-5_at
11359
P
5.2e-005
AFFX-CreX-3_at
15962.2
P
4.4e-005
AFFX-DapX-5_at
85.5
P
0.001248
AFFX-DapX-M_at
456.4
P
0.001796
AFFX-DapX-3_at
840.2
P
7e-005
AFFX-LysX-5_at
33
A
0.108979
AFFX-LysX-M_at
82.1
A
0.185131
AFFX-LysX-3_at
209.8
P
0.000195
AFFX-PheX-5_at
25.4
A
0.250796
AFFX-PheX-M_at
54.3
P
0.033677
AFFX-PheX-3_at
172.7
P
0.015183
AFFX-ThrX-5_at
35.2
A
0.287743
AFFX-ThrX-M_at
109.5
P
0.011384
Total number of rows:
54675
Table truncated, full table size
1440 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM46886.CEL.gz
8.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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