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Sample GSM46899 Query DataSets for GSM46899
Status Public on Mar 31, 2005
Title Colon - 23940
Sample type RNA
 
Source name Colon
Organism Homo sapiens
Extracted molecule total RNA
 
Description Quality metric = 28S to 18S: 1.5
Patient Age: 70-80
Gender: Male
Ethnic Background: Caucasian
Tobacco Use : No
Years of Tobacco Use: None
Alcohol Consumption?: No
Family History of Cancer?: No
Days from Patient Diagnosis to Excision: 30
Screening studies performed?: No
Diagnosis made by: Colonoscopy
Primary Site: Colon
Histology: Mucinous Carcinoma
 
Submission date Mar 31, 2005
Last update date Aug 28, 2018
Contact name Erin Curley
E-mail(s) [email protected]
Phone 602-343-8808
Fax 602-343-8440
URL http://www.intgen.org
Organization name IGC
Department
Lab expO
Street address 445 N. 5th Street
City Phoenix
State/province AZ
ZIP/Postal code 85004
Country USA
 
Platform ID GPL570
Series (1)
GSE2109 Expression Project for Oncology (expO)
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF The name of the probe set, blank for control probes
VALUE The signal value calculated by MAS5, normalized
ABS_CALL The detection value calculated by the MAS5
DETECTION P-VALUE The detection p-value calculated by the MAS5

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 730.4 P 0.000662
AFFX-BioB-M_at 850.8 P 4.4e-005
AFFX-BioB-3_at 458.2 P 5.2e-005
AFFX-BioC-5_at 1622.4 P 4.4e-005
AFFX-BioC-3_at 2406.6 P 4.4e-005
AFFX-BioDn-5_at 4360 P 4.4e-005
AFFX-BioDn-3_at 7793.8 P 4.4e-005
AFFX-CreX-5_at 18672.1 P 5.2e-005
AFFX-CreX-3_at 25560.9 P 4.4e-005
AFFX-DapX-5_at 33.7 A 0.239063
AFFX-DapX-M_at 42.9 A 0.41138
AFFX-DapX-3_at 124 P 0.000509
AFFX-LysX-5_at 35.9 A 0.123572
AFFX-LysX-M_at 61 A 0.165861
AFFX-LysX-3_at 57.7 P 0.006187
AFFX-PheX-5_at 11 A 0.9273
AFFX-PheX-M_at 7.7 A 0.783476
AFFX-PheX-3_at 15 A 0.617401
AFFX-ThrX-5_at 8.3 A 0.772364
AFFX-ThrX-M_at 3.4 A 0.969024

Total number of rows: 54675

Table truncated, full table size 1442 Kbytes.




Supplementary file Size Download File type/resource
GSM46899.CEL.gz 8.2 Mb (ftp)(http) CEL
Processed data included within Sample table
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