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GEO accession:
Sample GSM46996
Query DataSets for GSM46996
Status
Public on Apr 01, 2006
Title
CGR8 mouse embryonic stem cells time-course experiment technical replicate
Sample type
RNA
Channel 1
Source name
day 3 embryoid bodies CGR8 hanging drop
Organism
Mus musculus
Extracted molecule
total RNA
Channel 2
Source name
day 0 embryoid bodies CGR8 undifferentiated
Organism
Mus musculus
Extracted molecule
total RNA
Description
time-course experiment with embryoid bodies of CGR8 mouse embryonic stem cells ; in the whole time-series RNA from 0 days old embryoid bodies were hybridized against RNA from 3 days and 10 days old embryoid bodies
Submission date
Apr 01, 2005
Last update date
May 29, 2005
Contact name
Christian Robert Voolstra
E-mail(s)
[email protected]
URL
http://faculty.kaust.edu.sa/sites/christianvoolstra/Pages/home.aspx
Organization name
King Abdullah University of Science and Technology
Street address
Red Sea Research Center
City
Thuwal
ZIP/Postal code
23955
Country
Saudi Arabia
Platform ID
GPL1942
Series (1)
GSE2469
CGR8 mouse embryonic stem cells time-course experiment 0 days old vs 3 days old , 0days old vs 10 days old
Data table header descriptions
ID_REF
IA
printip lowess normalized intensity channel A
IB
printip lowess normalized intensity channel B
VALUE
log2 ratio (IA / IB)
FlagA
quality check A B C = good , X Y Z = bad
FlagB
quality check A B C = good , X Y Z = bad
Data table
ID_REF
IA
IB
VALUE
FlagA
FlagB
1
723
810
-0.163926261
X
X
2
0
0
null
X
Y
3
347
175
0.987580741
X
X
4
606
264
1.198779864
X
X
5
44
176
-2
X
X
6
0
0
null
X
Y
7
26198
40848
-0.640808765
C
C
8
45818
49144
-0.101100803
C
C
9
62709
60064
0.062171958
C
C
10
61207
47717
0.359193315
C
C
11
12482
17347
-0.474837067
C
C
12
4586
10157
-1.147166087
X
B
13
14491
16079
-0.150020528
C
C
14
0
0
null
Z
Z
15
0
0
null
X
Y
16
1150
484
1.248554909
X
X
17
3076
2451
0.327685019
X
X
18
3631
2650
0.45437457
X
X
19
8906
7005
0.346392561
C
C
20
11206
6325
0.825134013
X
X
Total number of rows:
46128
Table truncated, full table size
1416 Kbytes
.
Supplementary data files not provided
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