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Sample GSM475616 Query DataSets for GSM475616
Status Public on Nov 25, 2009
Title 25 ng/hr leptin_8
Sample type RNA
 
Source name adult male liver, treated with 25 ng/hr leptin
Organism Mus musculus
Characteristics tissue: liver
agent: untreated
dose: 25 ng/hr
time: 12 days
Treatment protocol Animals were treated for 12 days with leptin at defined doses.
Extracted molecule total RNA
Extraction protocol Livers were extracted and flash frozen and later processed for RNA using a Trizol protocol.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description adult male mouse
4240351001_H
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Nov 25, 2009
Last update date Mar 08, 2017
Contact name Kristina Hedbacker
E-mail(s) [email protected]
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10065
Country USA
 
Platform ID GPL6885
Series (1)
GSE19185 Low dose Leptin (25 ng/hr and 12.5 ng/hr) in ob/ob mice

Data table header descriptions
ID_REF
VALUE quantile-normalised signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1220234 404.0516 0
ILMN_2592166 381.2524 0
ILMN_3158509 1038.617 0
ILMN_1236788 427.0676 0
ILMN_2881950 937.1786 0
ILMN_2930897 340.4596 0
ILMN_2860915 3487.29 0
ILMN_2818498 1570.699 0
ILMN_2798129 501.9406 0
ILMN_1254721 2653.219 0
ILMN_1227404 1245.792 0
ILMN_2680054 758.3363 0
ILMN_1216720 239.1763 0
ILMN_2965669 1385.097 0
ILMN_2693922 924.5964 0
ILMN_3052260 476.5486 0
ILMN_3128725 490.7505 0
ILMN_2835423 143.3388 0
ILMN_1213805 790.8245 0
ILMN_2655184 2827.69 0

Total number of rows: 25697

Table truncated, full table size 715 Kbytes.




Supplementary data files not provided
Processed data included within Sample table
Processed data are available on Series record

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