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GEO accession:
Sample GSM47876
Query DataSets for GSM47876
Status
Public on Nov 08, 2005
Title
SW620-poly-2
Sample type
RNA
Source name
polysomal RNA fractions of SW620 RNA
Organism
Homo sapiens
Extracted molecule
total RNA
Description
after ultracentrifugation on sucrose gradients of cell lysates, polysomal RNA fractions were collected and hybridized. SW620 are metastatic colon cancer cells isogenic with SW480 cells.
Submission date
Apr 08, 2005
Last update date
May 29, 2005
Contact name
Alessandro Provenzani
E-mail(s)
[email protected]
Phone
+390461283094
Organization name
University of Trento
Department
CIBIO
Lab
Laboratory of Genomic Screening
Street address
via delle regole 101
City
Trento
ZIP/Postal code
38100
Country
Italy
Platform ID
GPL96
Series (1)
GSE2509
Colon cancer progression-polysomal difference
Data table header descriptions
ID_REF
VALUE
probe set intensity according to GCOS software
ABS CALL
probe set is P=present or A=absent according to GCOS software
DETECTION P-VALUE
p-value associated with ABS CALL, reflects the confidence of the Detection Call
Data table
ID_REF
VALUE
ABS CALL
DETECTION P-VALUE
AFFX-BioB-5_at
110.9
P
0.00141
AFFX-BioB-M_at
192.2
P
0.000044
AFFX-BioB-3_at
117.4
P
0.00011
AFFX-BioC-5_at
313.9
P
0.000081
AFFX-BioC-3_at
244.7
P
0.000044
AFFX-BioDn-5_at
234.6
P
0.000044
AFFX-BioDn-3_at
1319.7
P
0.00006
AFFX-CreX-5_at
2977.6
P
0.000044
AFFX-CreX-3_at
4571.2
P
0.000044
AFFX-DapX-5_at
7.5
A
0.0727
AFFX-DapX-M_at
8.3
A
0.165861
AFFX-DapX-3_at
1.1
A
0.737173
AFFX-LysX-5_at
5.7
A
0.327079
AFFX-LysX-M_at
0.9
A
0.783476
AFFX-LysX-3_at
4.8
A
0.340661
AFFX-PheX-5_at
0.4
A
0.969024
AFFX-PheX-M_at
2.4
A
0.794268
AFFX-PheX-3_at
11.1
A
0.440646
AFFX-ThrX-5_at
2.1
A
0.852061
AFFX-ThrX-M_at
1.4
A
0.834139
Total number of rows:
22283
Table truncated, full table size
577 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM47876.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM47876.EXP.EXP.gz
517 b
(ftp)
(http)
EXP
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