GEO help: Mouse over screen elements for information.
Status
Public on Apr 13, 2006
Title
MD ligament
Sample type
RNA
Source name
ligament
Organism
Homo sapiens Extracted molecule
total RNA
Description
cells isolated from patients with periodontitis were grown in tissue culture and used between 4-6 passage. Total RNA was extracted using an Ambion RNaqueous RNA extraction kit. Targets were produced using Affymetrix procedure (using Enzo IVT kit) from 5ug of total RNA. 3 biological replicates were analysed per each group. Sample also known as mMD_L
Submission date
Apr 12, 2005
Last update date
May 29, 2005
Contact name
Agnieszka Maria Lichanska
E-mail(s)
[email protected] Phone
+1 703 444 7188
Organization name
Tessarae, LLC
Street address
City
Potomac Falls
State/province
VA
ZIP/Postal code
20165
Country
USA
Platform ID
GPL96 Series (1)
GSE2525 Periodontal regeneration study
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
35.5
P
0.010317
AFFX-BioB-M_at
41.9
P
0.00034
AFFX-BioB-3_at
23
P
0.01667
AFFX-BioC-5_at
62.4
P
0.000297
AFFX-BioC-3_at
56.7
P
0.000509
AFFX-BioDn-5_at
80.8
P
0.000972
AFFX-BioDn-3_at
475.1
P
0.000258
AFFX-CreX-5_at
875.7
P
0.000044
AFFX-CreX-3_at
1421.5
P
0.000044
AFFX-DapX-5_at
2.1
A
0.354453
AFFX-DapX-M_at
2.6
A
0.313723
AFFX-DapX-3_at
0.8
A
0.834139
AFFX-LysX-5_at
2.3
A
0.617401
AFFX-LysX-M_at
6.8
A
0.382599
AFFX-LysX-3_at
1.7
A
0.089478
AFFX-PheX-5_at
0.3
A
0.937071
AFFX-PheX-M_at
0.5
A
0.876428
AFFX-PheX-3_at
6.1
A
0.287743
AFFX-ThrX-5_at
1.1
A
0.804734
AFFX-ThrX-M_at
5.6
A
0.368438
22283 575 Kbytes .Supplementary file Size Download File type/resource GSM48101.CEL.gz
3.6 Mb
(ftp) (http) CEL
GSM48101.EXP.gz
524 b
(ftp) (http) EXP
