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Status
Public on Apr 13, 2006
Title
CH regenerating cells
Sample type
RNA
Source name
regenerating cells
Organism
Homo sapiens Extracted molecule
total RNA
Description
cells isolated from patients with periodontitis were grown in tissue culture and used between 4-6 passage. Total RNA was extracted using an Ambion RNaqueous RNA extraction kit. Targets were produced using Affymetrix procedure (using Enzo IVT kit) from 5ug of total RNA. 3 biological replicates were analysed per each group. Sample also known as mCH_R.
Submission date
Apr 12, 2005
Last update date
May 29, 2005
Contact name
Agnieszka Maria Lichanska
E-mail(s)
[email protected] Phone
+1 703 444 7188
Organization name
Tessarae, LLC
Street address
City
Potomac Falls
State/province
VA
ZIP/Postal code
20165
Country
USA
Platform ID
GPL96 Series (1)
GSE2525 Periodontal regeneration study
Data table header descriptions ID_REF
VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE AFFX-BioB-5_at
42.3
M
0.058444
AFFX-BioB-M_at
90.9
P
0.001593
AFFX-BioB-3_at
33.8
P
0.021902
AFFX-BioC-5_at
112.6
P
0.000147
AFFX-BioC-3_at
62.8
P
0.000581
AFFX-BioDn-5_at
98.7
P
0.000972
AFFX-BioDn-3_at
749.3
P
0.000446
AFFX-CreX-5_at
989.1
P
0.000044
AFFX-CreX-3_at
1533.5
P
0.000044
AFFX-DapX-5_at
4.4
A
0.227636
AFFX-DapX-M_at
5.8
A
0.175328
AFFX-DapX-3_at
0.8
A
0.824672
AFFX-LysX-5_at
3.8
A
0.39692
AFFX-LysX-M_at
13.3
A
0.354453
AFFX-LysX-3_at
6.5
A
0.455413
AFFX-PheX-5_at
1.2
A
0.804734
AFFX-PheX-M_at
0.8
A
0.916408
AFFX-PheX-3_at
5.7
A
0.382599
AFFX-ThrX-5_at
2.6
A
0.868639
AFFX-ThrX-M_at
4.8
A
0.631562
22283 578 Kbytes .Supplementary file Size Download File type/resource GSM48106.CEL.gz
3.5 Mb
(ftp) (http) CEL
GSM48106.EXP.gz
482 b
(ftp) (http) EXP
