|
| Status |
Public on Jul 28, 2005 |
| Title |
B2-T |
| Sample type |
RNA |
| |
|
| Source name |
Primary Breast Cancer
|
| Organism |
Homo sapiens |
| Characteristics |
name: B2-T
age at dx: 59
tumor size (cm): 4.5
pos lymph nodes: 10
all lymph nodes: 21
path er status: N
path pr status: N
her2 status: N
van't veer signature: Bad Prognosis
binary 5y met event: --
met event: 0
mfs (yr): 3.90
lm event: 0
lmfs (yr): 3.90
bm event: 0
bmfs (yr): 3.90
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNA was extracted using a Qiagen RNeasy kit from homogenized frozen tumors
|
| Label |
biotin
|
| Label protocol |
Standard Affymetrix protocol
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocol
|
| Scan protocol |
Standard Affymetrix protocol
|
| Description |
RNA was extracted using a Quiagen RNeasy kit from homogenized frozen tumors
|
| Data processing |
MAS 5.0
|
| |
|
| Submission date |
May 03, 2005 |
| Last update date |
May 31, 2013 |
| Contact name |
Agnes Viale |
| E-mail(s) |
[email protected]
|
| Phone |
212 639 3031
|
| Fax |
212 717 3053
|
| Organization name |
Memorial Sloan Kettering Cancer Center
|
| Department |
Molecular Biology
|
| Lab |
Genomics Core Laboratory
|
| Street address |
1275 York Avenue
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10021 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (1) |
| GSE2603 |
Subpopulations of MDA-MB-231 and Primary Breast Cancers |
|
| Relations |
| Reanalyzed by |
GSE31519 |
| Reanalyzed by |
GSE47561 |
