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Sample GSM502492 Query DataSets for GSM502492
Status Public on Jan 19, 2012
Title Sample93_phenotype0_race1
Sample type RNA
 
Source name peripheral blood cells
Organism Homo sapiens
Characteristics disease state: no atherosclerosis
ethnicity: non-Hispanic white
tissue: blood
Extracted molecule total RNA
Extraction protocol standard as recommended by illumina
Label Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Female peripheral blood samples for atherosclerosis study
Data processing The data was log transformed and then quantile normalized based on the output of Illumina BeadStudio software.
 
Submission date Jan 29, 2010
Last update date Jan 19, 2012
Contact name Chiang-Ching Huang
E-mail(s) [email protected]
Organization name Northwestern University
Street address 680 N. Lake Shore Dr., Suite 1400
City Chicago
State/province IL
ZIP/Postal code 60611
Country USA
 
Platform ID GPL6104
Series (1)
GSE20129 Atherosclerosis study using female peripheral blood samples

Data table header descriptions
ID_REF
VALUE normalized signal intensity
RAW_VALUE raw signal intensity
BEAD_STDERR the standard error of the probe measurements
Detection_Pval the detection p-value of the probe
Avg_NBEADS Number of beads for the probe

Data table
ID_REF VALUE RAW_VALUE BEAD_STDERR Detection_Pval Avg_NBEADS
ILMN_1809034 4.892736026 146.7065 6.873929 0 37
ILMN_1660305 5.002379722 162.3518 4.894783 0 24
ILMN_1792173 5.284043983 239.0773 10.84525 0 36
ILMN_1762337 4.162843986 57.83435 2.041898 0.9072753 58
ILMN_1736007 4.353920486 72.63431 2.63386 0.2610556 45
ILMN_1787689 4.344953827 70.74234 2.607964 0.3366619 50
ILMN_1731507 4.098108335 54.0369 2.567905 0.9714693 31
ILMN_1814316 4.297118561 67.40081 2.640307 0.5007133 41
ILMN_1745607 4.292632949 66.07432 2.95963 0.5634807 35
ILMN_1757454 4.314232398 68.85256 2.93236 0.4308131 36
ILMN_1735045 4.3515556 72.7496 2.825604 0.2582026 34
ILMN_1680754 4.287538696 65.79945 3.585631 0.5734665 34
ILMN_1659452 4.324529915 69.36581 3.407603 0.3851641 45
ILMN_1767388 4.517589161 86.35318 3.582246 0.01854494 45
ILMN_1673870 4.286270633 66.92659 2.840912 0.5249643 43
ILMN_1675204 4.310927012 68.12744 3.594468 0.4664765 31
ILMN_1755321 4.568474997 97.95061 4.001089 0 49
ILMN_1698554 4.602507334 97.67255 3.678692 0 36
ILMN_1805938 4.235534468 65.23696 2.986926 0.6134094 41
ILMN_1676336 4.941150762 141.7514 3.426953 0 58

Total number of rows: 22184

Table truncated, full table size 1127 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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