|
| Status |
Public on Feb 20, 2021 |
| Title |
niPSC2_PD_MEF_hTS_P5 |
| Sample type |
SRA |
| |
|
| Source name |
trophoblast stem cell culture
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: pluripotent stem cell derived trophoblast stem cell cultures
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Cell lysate and RNA are prepared using Trizol/Chloroform
Sequencing libraries are prepared using TruSeq RNA Sample Prep Kit( Illumina), following ribosomal RNA depletion using Ribozero(Illumina)
|
| |
|
| Library strategy |
RNA-Seq |
| Library source |
transcriptomic |
| Library selection |
cDNA |
| Instrument model |
Illumina NovaSeq 6000 |
| |
|
| Description |
stem cell derived trophoblast stem cell cultures
|
| Data processing |
STAR alignement
HTseq-count
Genome_build: hg38
Supplementary_files_format_and_content: raw reads count text format
|
| |
|
| Submission date |
Feb 19, 2021 |
| Last update date |
Feb 20, 2021 |
| Contact name |
Giuliano Giuseppe Stirparo |
| E-mail(s) |
[email protected]
|
| Organization name |
Cerevance ltd
|
| Street address |
418 Cambridge Science Park Milton Rd
|
| City |
Cambridge |
| State/province |
Cambridgeshire |
| ZIP/Postal code |
CB4 0PZ |
| Country |
United Kingdom |
| |
|
| Platform ID |
GPL24676 |
| Series (1) |
| GSE167089 |
Human Naïve Epiblast Cells Possess Unrestricted Lineage Potential II |
|
| Relations |
| BioSample |
SAMN17987329 |
| SRA |
SRX10131592 |
