|
Status |
Public on Feb 20, 2021 |
Title |
niPSC4_PD/A8301_MEF_hTS_P5 |
Sample type |
SRA |
|
|
Source name |
trophoblast stem cell culture
|
Organism |
Homo sapiens |
Characteristics |
cell type: pluripotent stem cell derived trophoblast stem cell cultures
|
Extracted molecule |
total RNA |
Extraction protocol |
Cell lysate and RNA are prepared using Trizol/Chloroform Sequencing libraries are prepared using TruSeq RNA Sample Prep Kit( Illumina), following ribosomal RNA depletion using Ribozero(Illumina)
|
|
|
Library strategy |
RNA-Seq |
Library source |
transcriptomic |
Library selection |
cDNA |
Instrument model |
Illumina NovaSeq 6000 |
|
|
Description |
stem cell derived trophoblast stem cell cultures
|
Data processing |
STAR alignement HTseq-count Genome_build: hg38 Supplementary_files_format_and_content: raw reads count text format
|
|
|
Submission date |
Feb 19, 2021 |
Last update date |
Feb 20, 2021 |
Contact name |
Giuliano Giuseppe Stirparo |
E-mail(s) |
[email protected]
|
Organization name |
Cerevance ltd
|
Street address |
418 Cambridge Science Park Milton Rd
|
City |
Cambridge |
State/province |
Cambridgeshire |
ZIP/Postal code |
CB4 0PZ |
Country |
United Kingdom |
|
|
Platform ID |
GPL24676 |
Series (1) |
GSE167089 |
Human Naïve Epiblast Cells Possess Unrestricted Lineage Potential II |
|
Relations |
BioSample |
SAMN17987430 |
SRA |
SRX10131594 |