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Sample GSM51902

Query DataSets for GSM51902

Status

Public on Jul 19, 2005

Title

1279_BMA_2

Sample type

RNA

Source name

Wild-type BMA64

Organism

Saccharomyces cerevisiae

Extracted molecule

total RNA

Description

Strain background is BMA64 with plasmid expressing TRP marker Media is SD -Trp (synthetic dextrose minimal media missing tryptophan) Cells were grown until midlog and harvested at OD600=0.4; MAS5 (Statistical Algorithm) Scaling:All Probe Sets Target Signal 500;Normalization:All Probe Sets; Alpha1=0.04; Alpha2=0.06; Tau=0.015

Submission date

May 19, 2005

Last update date

May 29, 2005

Contact name

Guillaume Francois Chanfreau

E-mail(s)

[email protected]

Phone

1-310-825-4399

Organization name

UCLA

Department

Chemistry and Biochemistry

Street address

607 Charles E. Young Drive East

City

Los Angeles

State/province

ZIP/Postal code

90095-1569

Country

USA

Platform ID

GPL90

Series (1)

GSE2683

Rnt1 KO Sc and Wild-type BMA64 Sc

Data table header descriptions
ID_REF
VALUE	MAS5 SA Signal
ABS_CALL	MAS5 SA Detection
DETECTION P-VALUE	MAS5 SA Detection P-value

Data table
ID_REF	VALUE	ABS_CALL	DETECTION P-VALUE
AFFX-MurIL2_at	5.1	A	0.987466
AFFX-MurIL10_at	2.7	A	0.960352
AFFX-MurIL4_at	1.1	A	0.949786
AFFX-MurFAS_at	28	A	0.455413
AFFX-BioB-5_at	247.1	P	0.003592
AFFX-BioB-M_at	345.6	P	0.00034
AFFX-BioB-3_at	275.6	P	0.000446
AFFX-BioC-5_at	603.2	P	0.000127
AFFX-BioC-3_at	595.2	P	0.000081
AFFX-BioDn-5_at	559.4	P	0.000044
AFFX-BioDn-3_at	4962.1	P	0.000044
AFFX-CreX-5_at	6338.5	P	0.000044
AFFX-CreX-3_at	10688.2	P	0.000044
AFFX-BioB-5_st	25.6	A	0.559354
AFFX-BioB-M_st	19.1	A	0.724854
AFFX-BioB-3_st	5.2	A	0.814869
AFFX-BioC-5_st	9.6	A	0.794288
AFFX-BioC-3_st	5.8	A	0.699394
AFFX-BioDn-5_st	46.4	A	0.368438
AFFX-BioDn-3_st	77.8	P	0.01667

Total number of rows: 9335

Table truncated, full table size 226 Kbytes.

Supplementary data files not provided