|
| Status |
Public on Oct 01, 2010 |
| Title |
CLL cells PB patient #13 replicate1 |
| Sample type |
RNA |
| |
|
| Source name |
PB derived CLL cells
|
| Organism |
Homo sapiens |
| Characteristics |
cell type: CLL
origin: Peripheral blood
patient: patient #13
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Total RNA was extracted using Qiagen RNA extraction kit
|
| Label |
biotin
|
| Label protocol |
Biotin labeled with Affymetrix's IVT labeling kits (Affymetrix, Santa Clara, CA).
|
| |
|
| Hybridization protocol |
Fragmented RNA was assessed for relative length on Agilent 2100 bioanalyzer and hybridized to Affymetrix HG-U133 Plus 2.0 chips for 16 hours.
|
| Scan protocol |
Affymetrix GeneChip scanner
|
| Description |
primary CLL cells
|
| Data processing |
Intensities were pre-processed with MAS5.0, and further processed with variance stablization transformation
|
| |
|
| Submission date |
Mar 23, 2010 |
| Last update date |
Nov 14, 2018 |
| Contact name |
Adrian Wiestner |
| E-mail(s) |
[email protected]
|
| Phone |
301-594-6855
|
| Organization name |
NHLBI/NIH
|
| Department |
Hematology Branch
|
| Street address |
10 Center Dr
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
20892 |
| Country |
USA |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE21029 |
The lymph node microenvironment promotes B-cell receptor signaling, NF-κB activation, and tumor proliferation in chronic lymphocytic leukemia (CLL) |
|
| Relations |
| Reanalyzed by |
GSE122511 |
