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GEO accession:
Sample GSM52663
Query DataSets for GSM52663
Status
Public on Dec 20, 2005
Title
11n
Sample type
RNA
Source name
Trizol extracted total RNA from myometrium tissue. Trizol extracted total RNA from myometrium tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Myometrium tissue.
Submission date
May 30, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2724
The effect of FH mutations on fibroid expression profile, normal myometrium vs. FH-mutant fibroids.
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
117.8
P
0.002556
AFFX-BioB-M_at
136.8
P
0.000044
AFFX-BioB-3_at
84.6
P
0.00007
AFFX-BioC-5_at
282.7
P
0.00011
AFFX-BioC-3_at
246.7
P
0.000044
AFFX-BioDn-5_at
199
P
0.000044
AFFX-BioDn-3_at
1507.2
P
0.000095
AFFX-CreX-5_at
2895
P
0.000044
AFFX-CreX-3_at
4032.3
P
0.000044
AFFX-DapX-5_at
4.3
A
0.425962
AFFX-DapX-M_at
12.2
A
0.147939
AFFX-DapX-3_at
2
A
0.834139
AFFX-LysX-5_at
0.9
A
0.737173
AFFX-LysX-M_at
15.4
A
0.287743
AFFX-LysX-3_at
5.4
A
0.195266
AFFX-PheX-5_at
1.3
A
0.814869
AFFX-PheX-M_at
1.4
A
0.852061
AFFX-PheX-3_at
14.9
A
0.41138
AFFX-ThrX-5_at
2.4
A
0.58862
AFFX-ThrX-M_at
0.9
A
0.916408
Total number of rows:
22283
Table truncated, full table size
580 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM52663.CEL.gz
3.3 Mb
(ftp)
(http)
CEL
GSM52663.EXP.gz
486 b
(ftp)
(http)
EXP
GSM52663.RPT.gz
943 b
(ftp)
(http)
RPT
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