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GEO accession:
Sample GSM52675
Query DataSets for GSM52675
Status
Public on Dec 20, 2005
Title
MO32_8
Sample type
RNA
Source name
Trizol extracted total RNA from uterine fibroid tissue.
Organism
Homo sapiens
Extracted molecule
total RNA
Description
Uterine fibroid tissue with mutated fumarate hydratase gene.
Submission date
May 30, 2005
Last update date
Dec 20, 2005
Contact name
Sakari Vanharanta
E-mail(s)
[email protected]
Organization name
University of Helsinki
Department
Translational Cancer Medicine Program
Lab
Vanharanta
Street address
Haartmaninkatu 8
City
Helsinki
ZIP/Postal code
00014
Country
Finland
Platform ID
GPL96
Series (1)
GSE2725
The effect of FH mutations on fibroid expression profile 2.
Data table header descriptions
ID_REF
VALUE
MAS 5.0 Algorithm (mean scaled to 100)
ABS_CALL
MAS 5.0 Absent, Marginal, Present call (Alpha1 = 0.05, Alpha2 = 0.065)
DETECTION P-VALUE
MAS 5.0 Detection p-value
Data table
ID_REF
VALUE
ABS_CALL
DETECTION P-VALUE
AFFX-BioB-5_at
36.2
P
0.004484
AFFX-BioB-M_at
65.4
P
0.000127
AFFX-BioB-3_at
44.5
P
0.000581
AFFX-BioC-5_at
64.3
P
0.000258
AFFX-BioC-3_at
47
P
0.000509
AFFX-BioDn-5_at
155.3
P
0.000169
AFFX-BioDn-3_at
571.7
P
0.000195
AFFX-CreX-5_at
925.4
P
0.000044
AFFX-CreX-3_at
1608
P
0.000044
AFFX-DapX-5_at
1
A
0.686277
AFFX-DapX-M_at
7.1
A
0.368438
AFFX-DapX-3_at
1.1
A
0.910522
AFFX-LysX-5_at
0.4
A
0.804734
AFFX-LysX-M_at
7.4
A
0.470241
AFFX-LysX-3_at
1.2
A
0.559354
AFFX-PheX-5_at
1.3
A
0.737173
AFFX-PheX-M_at
0.6
A
0.941556
AFFX-PheX-3_at
10.4
A
0.354453
AFFX-ThrX-5_at
3.1
A
0.659339
AFFX-ThrX-M_at
2.8
A
0.544587
Total number of rows:
22283
Table truncated, full table size
579 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM52675.CEL.gz
3.4 Mb
(ftp)
(http)
CEL
GSM52675.EXP.gz
505 b
(ftp)
(http)
EXP
GSM52675.RPT.gz
945 b
(ftp)
(http)
RPT
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