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Sample GSM532821 Query DataSets for GSM532821
Status Public on Apr 24, 2010
Title control 3
Sample type RNA
 
Source name blood
Organism Homo sapiens
Characteristics patient type: control 3
gender: male
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate3
Data processing The signal intensity was background subtracted and subsequently used for analysis
 
Submission date Apr 13, 2010
Last update date Apr 23, 2010
Contact name Kandiah Jeyaseelan
E-mail(s) [email protected]
Organization name National University of Singapore
Department Biochemistry
Street address 8 Medical Drive
City Singapore
ZIP/Postal code 117597
Country Singapore
 
Platform ID GPL6883
Series (2)
GSE21321 Blood microRNA profiles and upregulation of hsa-miR-144 in males with type 2 diabetes mellitus.
GSE26168 Type 2 Diabetes mellitus: mRNA and miRNA profiling

Data table header descriptions
ID_REF
VALUE background subtracted signal value
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1809034 2.9 0.35861
ILMN_1660305 70 0
ILMN_1762337 -1.4 0.47393
ILMN_2055271 13.8 0.17378
ILMN_1814316 -25 0.9921
ILMN_2359168 -4.8 0.60348
ILMN_1731507 20.2 0.09005
ILMN_1787689 28.5 0.04423
ILMN_1745607 -9.9 0.76303
ILMN_2136495 -19.5 0.96367
ILMN_1668111 -16.5 0.93049
ILMN_2295559 -9.8 0.76145
ILMN_1735045 -1.7 0.48815
ILMN_1680754 46.4 0
ILMN_2375184 1.1 0.39021
ILMN_1659452 -1.5 0.47551
ILMN_1767388 -1.3 0.46919
ILMN_1675204 -18.3 0.95893
ILMN_1673870 -0.4 0.4376
ILMN_1755321 35.3 0.01896

Total number of rows: 24526

Table truncated, full table size 566 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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