|
| Status |
Public on Dec 29, 2021 |
| Title |
genomic DNA from PBMC 30 |
| Sample type |
genomic |
| |
|
| Source name |
PBMC sample 30
|
| Organism |
Homo sapiens |
| Characteristics |
timepoint: baseline
gender: Female
race: W
age: 66
disease state: abnormal
tissue: PBMC
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
DNA was extracted from PBMCs using QIAamp DNA Blood Mini Kit according to standard instructions
|
| Label |
Cy5 and Cy3
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
abnormalPBMC sample
|
| Data processing |
ChAMP 2.12.4
|
| |
|
| Submission date |
Jun 25, 2021 |
| Last update date |
Dec 29, 2021 |
| Contact name |
Michael Anton Bauer |
| E-mail(s) |
[email protected]
|
| Organization name |
University of Arkansas for Medical Sciences
|
| Department |
Biomedical Informatics
|
| Street address |
4301 W Markham Slot 782
|
| City |
Little Rock |
| State/province |
United States |
| ZIP/Postal code |
72205 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE178887 |
Epigenome analysis of doxorubicin-induced cardiotoxicity before and after treatemt of breast cancer patients |
|
