GEO help: Mouse over screen elements for information.
Status
Public on Jun 20, 2005
Title
BM2
Sample type
RNA
Source name
Bone marrow tissue from WT C57BL/6 male mice
Organism
Mus musculus Characteristics
Strain: C57BL/6
Extracted molecule
total RNA
Label
biotin
Description
full description of sample found in Elena M. Comelli, Steven R. Head, Tim Gilmartin, Thomas Whisenant, Stuart M. Haslam, Simon J. North, Nyet-Kui Wong, Takashi Kudo, Hisashi Narimatsu, Jeffrey D. Esko, Kurt Drickamer, Anne Dell, and James C. Paulson. (2005) A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome.
Data processing
dCHIPv1.3, PM-only algorithm
Submission date
Jun 08, 2005
Last update date
Jun 20, 2005
Contact name
Jennifer A Hammond
E-mail(s)
[email protected] Phone
(858) 784-2263
Fax
(858) 784-2754
URL
http://www.scripps.edu/researchservices/dna_array/ Organization name
The Scripps Research Institute
Lab
DNA Array Core Facility
Street address
10550 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL1981 Series (1)
GSE2781 A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome
Data table header descriptions ID_REF VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 115855_U74BTARSEQ_at
448.244
P
0.023926
1405_i_at
181.625
A
0.963203
200004_at
4400.21
P
0.000244
200010_at
538.204
M
0.056152
200012_x_at
2103.54
P
0.023926
200017_at
368.753
P
0.000732
200024_at
1372.65
A
0.080566
200025_s_at
63.1201
M
0.056152
200026_at
1077.75
P
0.001953
200032_s_at
285.326
P
0.00415
200038_s_at
177.189
P
0.037598
200046_at
291.775
P
0.005859
200061_s_at
96.8088
A
0.095215
200068_s_at
176.13
A
0.171387
200089_s_at
231.769
A
0.303711
200091_s_at
219.645
A
0.27417
200095_x_at
275.328
P
0.018555
200642_at
223.21
A
0.633789
200643_at
329.098
A
0.780518
200647_x_at
286.802
A
0.5
1814 54 Kbytes .Supplementary data files not provided
