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Status
Public on Jun 20, 2005
Title
BM3
Sample type
RNA
Source name
Bone marrow tissue from WT C57BL/6 male mice
Organism
Mus musculus Characteristics
Strain: C57BL/6
Extracted molecule
total RNA
Label
biotin
Description
full description of sample found in Elena M. Comelli, Steven R. Head, Tim Gilmartin, Thomas Whisenant, Stuart M. Haslam, Simon J. North, Nyet-Kui Wong, Takashi Kudo, Hisashi Narimatsu, Jeffrey D. Esko, Kurt Drickamer, Anne Dell, and James C. Paulson. (2005) A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome.
Data processing
dCHIPv1.3, PM-only algorithm
Submission date
Jun 08, 2005
Last update date
Jun 20, 2005
Contact name
Jennifer A Hammond
E-mail(s)
[email protected] Phone
(858) 784-2263
Fax
(858) 784-2754
URL
http://www.scripps.edu/researchservices/dna_array/ Organization name
The Scripps Research Institute
Lab
DNA Array Core Facility
Street address
10550 N. Torrey Pines Rd.
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platform ID
GPL1981 Series (1)
GSE2781 A Focused Microarray Approach to Functional Glycomics: Transcriptional Regulation of the Glycome
Data table header descriptions ID_REF VALUE 'signal' a measure of the abundance of a transcript
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call
Data table ID_REF VALUE ABS_CALL DETECTION P-VALUE 115855_U74BTARSEQ_at
408.102
P
0.046143
1405_i_at
202.865
A
0.937979
200004_at
3885.04
P
0.000732
200010_at
709.034
P
0.018555
200012_x_at
2161.21
P
0.008057
200017_at
354.199
P
0.000732
200024_at
1379.6
M
0.056152
200025_s_at
53.6294
P
0.023926
200026_at
1271.93
P
0.000732
200032_s_at
273.279
P
0.010742
200038_s_at
175.312
A
0.080566
200046_at
275.913
P
0.001221
200061_s_at
59.2703
A
0.149658
200068_s_at
178.286
A
0.129639
200089_s_at
220.137
A
0.067627
200091_s_at
275.061
A
0.567627
200095_x_at
237.192
P
0.00293
200642_at
313.118
A
0.27417
200643_at
331.468
A
0.398926
200647_x_at
290.819
A
0.466064
1814 54 Kbytes .Supplementary data files not provided
