GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM6192
Query DataSets for GSM6192
Status
Public on Sep 12, 2003
Title
m1-WT2
Sample type
RNA
Source name
Ileum epithelials cells
Organism
Mus musculus
Extracted molecule
total RNA
Description
Cells captured via Arcturus LCM system, amplified (RiboAmp, 2 rounds) and labeled (Enzo) for hybridizaton to Affymetrix MG_U74Av2 arrays, using manufacturers protocols in each step.
Submission date
Apr 30, 2003
Last update date
Mar 17, 2006
Contact name
Matthew Feldman
E-mail(s)
[email protected]
Phone
574-631-3539
Fax
574-631-4048
Organization name
University of Notre Dame
Department
Chemistry and Biochemistry
Lab
Keck Center for Transgene Research
Street address
251 Nieuwland Science Hall
City
Notre Dame
State/province
IN
ZIP/Postal code
46556
Country
USA
Platform ID
GPL81
Series (1)
GSE422
Epithelium transition profile
Data table header descriptions
ID_REF
Stat_Pairs
Number of probe pairs for a particular probe set
Stat_Pairs_Used
Number of probe pairs per probe set used in the analysis
VALUE
Signal
ABS_CALL
Present or marginal or absent
Detection_p-value
P-value associated with detection call
Data table
ID_REF
Stat_Pairs
Stat_Pairs_Used
VALUE
ABS_CALL
Detection_p-value
AFFX-MurIL2_at
20
20
62.6
A
0.686277
AFFX-MurIL10_at
20
20
52.1
A
0.834139
AFFX-MurIL4_at
20
20
127.3
A
0.672935
AFFX-MurFAS_at
20
20
343
A
0.0727
AFFX-BioB-5_at
20
20
5557.7
P
0.000052
AFFX-BioB-M_at
20
20
12408.5
P
0.000052
AFFX-BioB-3_at
20
20
9679.3
P
0.000044
AFFX-BioC-5_at
20
20
21258.7
P
0.000044
AFFX-BioC-3_at
20
20
11115.4
P
0.000044
AFFX-BioDn-5_at
20
20
17212.6
P
0.000044
AFFX-BioDn-3_at
20
20
53957.5
P
0.000052
AFFX-CreX-5_at
20
20
169219.7
P
0.000044
AFFX-CreX-3_at
20
20
138833.7
P
0.000044
AFFX-BioB-5_st
20
20
620.6
P
0.001246
AFFX-BioB-M_st
20
20
534.4
P
0.006867
AFFX-BioB-3_st
20
20
693.5
A
0.108979
AFFX-BioC-5_st
20
20
244.9
A
0.470241
AFFX-BioC-3_st
20
20
237.5
A
0.250796
AFFX-BioDn-5_st
20
20
1888.5
P
0.002556
AFFX-BioDn-3_st
20
20
4147.8
P
0.000169
Total number of rows:
12488
Table truncated, full table size
395 Kbytes
.
Supplementary data files not provided
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
