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GEO accession:
Sample GSM62456
Query DataSets for GSM62456
Status
Public on Jun 28, 2006
Title
Human breast tumor92
Sample type
RNA
Channel 1
Source name
pool of individual breast tumors
Organism
Homo sapiens
Characteristics
pool of individual breast tumors
Extracted molecule
total RNA
Label
Cy3
Channel 2
Source name
Hu Breast Cancer S# 202
Organism
Homo sapiens
Characteristics
Hu Breast Cancer S# 202
Extracted molecule
total RNA
Label
Cy5
Description
human breast tumor RNA
Data processing
log ratio of mean pixel intensities of two channels
Submission date
Jun 28, 2005
Last update date
Jun 28, 2005
Contact name
Chang-Kyu Lee
E-mail(s)
[email protected]
Phone
(206)802-6360
Fax
(206)802-6411
Organization name
Rosetta Inpharmatics
Department
Informatics
Street address
401 Terry Ave N.
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Platform ID
GPL2567
Series (1)
GSE2845
Human breast tumor
Data table header descriptions
ID_REF
Rosetta generated unique probe identifier
VALUE
LogRatio of channels
LOGINTENSITY
Average log intensity of channels
PVALUE
P-value of LogRatio
QUALITY
1 - if good and non control, 0 - otherwise
Data table
ID_REF
VALUE
LOGINTENSITY
PVALUE
QUALITY
10012665102
-0.0636
-0.9499
8.4269e-001
1
10012665103
-0.0498
-0.8717
8.6708e-001
1
10012665104
-0.0175
-0.9996
9.5880e-001
1
10012665105
-0.2574
-1.0288
4.8641e-001
1
10012665106
-0.2034
-0.9683
5.7548e-001
1
10012665107
-0.0646
-1.0672
8.3430e-001
1
10012665108
0.1791
0.5297
1.0671e-003
1
10012665109
-0.0207
-1.0374
9.5440e-001
1
10012665110
0.0303
-0.0420
7.7517e-001
1
10012665111
-0.0001
-0.8732
9.9971e-001
1
10012665112
-0.0482
-0.9904
8.6359e-001
1
10012665113
0.0926
-0.7686
6.6046e-001
1
10012665114
-0.1064
-1.0951
7.9813e-001
1
10012665115
-0.0195
-0.4389
8.7905e-001
1
10012665116
-0.1634
-0.8732
5.8450e-001
1
10012665117
-0.0921
-1.0316
7.8129e-001
1
10012665118
-0.0113
-0.7389
9.5198e-001
1
10012665119
-0.1018
-1.0731
7.8583e-001
1
10012665120
-0.0373
-1.1192
9.2980e-001
1
10012665121
0.5517
-0.6244
1.8357e-003
1
Total number of rows:
24479
Table truncated, full table size
988 Kbytes
.
Supplementary data files not provided
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