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Sample GSM63051 Query DataSets for GSM63051
Status Public on Apr 11, 2006
Title Treatment: vehicle; time: 6 hours; repeat: 1
Sample type RNA
 
Source name LNCaP cells
Organism Homo sapiens
Characteristics LNCaP cells; Human, prostate carcinoma, metastasized to lymph node; Maintained in DMEM/8% charcoal-stripped serum for 3 days before treatment.
Treatment protocol In this experiment LNCaP cells
were treated with Vehicle (ethanol),
DHT (10 nM) or RTI-6413-018 (100 nM).
Treatment was done for 6 and 24 hrs.
The entire experiment was repeated 3 times.
Extracted molecule polyA RNA
Label Biotin
 
Description Vehicle control used to compare similar samples treated with DHT or RTI-6413-018
Data processing Standard Affymetrix scanning/normalization process
 
Submission date Jul 05, 2005
Last update date Apr 10, 2006
Contact name Dmitri A Kazmin
E-mail(s) [email protected]
Organization name Stanford University
Department Institute for Immunity, Transplantation and Infection
Lab Bali Pulendran
Street address 240 Pasteur Dr
City Palo Alto
State/province CA
ZIP/Postal code 94304
Country USA
 
Platform ID GPL96
Series (1)
GSE4636 Differential redulation of gene expression by an RTI SARM and canonical agonist of androgen receptor

Data table header descriptions
ID_REF
0068_1704_H133A_V6.1-2_Stat Pairs Probe pairs available (MM/PM)
0068_1704_H133A_V6.1-2_Stat Pairs Used Probe pairs used (MM/PM)
VALUE Absolute measured signal
ABS_CALL P/A call
DETECTION P-VALUE P/A call p-value

Data table
ID_REF 0068_1704_H133A_V6.1-2_Stat Pairs 0068_1704_H133A_V6.1-2_Stat Pairs Used VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 20 20 277.1 P 0.009337
AFFX-BioB-M_at 20 20 437.2 P 0.001593
AFFX-BioB-3_at 20 20 220.4 P 0.002023
AFFX-BioC-5_at 20 20 594.2 P 0.000297
AFFX-BioC-3_at 20 20 377.1 P 0.000258
AFFX-BioDn-5_at 20 20 705.4 P 0.00011
AFFX-BioDn-3_at 20 20 4138.9 P 0.00034
AFFX-CreX-5_at 20 20 6053.2 P 0.000044
AFFX-CreX-3_at 20 20 8831.4 P 0.000044
AFFX-DapX-5_at 20 20 3.6 A 0.455413
AFFX-DapX-M_at 20 20 25.5 A 0.239063
AFFX-DapX-3_at 20 20 5.9 A 0.897835
AFFX-LysX-5_at 20 20 3.5 A 0.672921
AFFX-LysX-M_at 20 20 9.6 A 0.659339
AFFX-LysX-3_at 20 20 5.2 A 0.631562
AFFX-PheX-5_at 20 20 2.7 A 0.941556
AFFX-PheX-M_at 20 20 1.8 A 0.876428
AFFX-PheX-3_at 20 20 14.7 A 0.783476
AFFX-ThrX-5_at 20 20 9.4 A 0.794268
AFFX-ThrX-M_at 20 20 29.1 A 0.470241

Total number of rows: 22283

Table truncated, full table size 723 Kbytes.




Supplementary file Size Download File type/resource
GSM63051.CEL.gz 3.5 Mb (ftp)(http) CEL

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