GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM6318495
Query DataSets for GSM6318495
Status
Public on Nov 16, 2022
Title
6_D7
Sample type
RNA
Source name
PBMC
Organism
Homo sapiens
Characteristics
cell type: PBMC
gender: M
timepoint: D7
subjectid: 6
group: TB-TRT
induration_mm: NA
centre: Taiwan
Extracted molecule
total RNA
Extraction protocol
Standard Qiagen Kit
Label
biotin
Label protocol
NuGEN Ovation WB
Hybridization protocol
NuGEN Ovation WB
Scan protocol
GeneChip(r) Scanner
Data processing
R/Bioconductor; GCRMA
Submission date
Jul 08, 2022
Last update date
Nov 16, 2022
Contact name
Margherita Coccia
E-mail(s)
[email protected]
Organization name
GSK Vaccines
Street address
Rue de l'Institut 89
City
Rixensart
ZIP/Postal code
1330
Country
Belgium
Platform ID
GPL570
Series (1)
GSE197408
Transcriptional signatures to AS01-adjuvanted tuberculosis vaccine in naïve and primed participants
Data table header descriptions
ID_REF
VALUE
GCRMA signal
Data table
ID_REF
VALUE
1007_s_at
5.828575108
1053_at
7.565251549
117_at
6.920242029
121_at
5.80237873
1255_g_at
2.106054736
1294_at
8.112235233
1316_at
5.266122635
1320_at
3.82765137
1405_i_at
10.47196741
1431_at
3.298662493
1438_at
3.796149064
1487_at
6.924511015
1494_f_at
3.12147428
1552256_a_at
4.016478695
1552257_a_at
7.309121775
1552258_at
6.025623664
1552261_at
3.681769242
1552263_at
8.062050651
1552264_a_at
9.286277248
1552266_at
2.076657353
Total number of rows:
54675
Table truncated, full table size
1057 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM6318495_52001900961798020417425527900007.CEL.gz
4.3 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
