GEO Publications
Handout
NAR 2024 (latest)
NAR 2002 (original)
All publications
FAQ
MIAME
Email GEO
NCBI
>
GEO
>
Accession Display
Not logged in |
Login
GEO help:
Mouse over screen elements for information.
Scope:
Self
Platform
Samples
Series
Family
Format:
HTML
SOFT
MINiML
Amount:
Brief
Quick
GEO accession:
Sample GSM6318569
Query DataSets for GSM6318569
Status
Public on Nov 16, 2022
Title
30_D30
Sample type
RNA
Source name
PBMC
Organism
Homo sapiens
Characteristics
cell type: PBMC
gender: M
timepoint: D30
subjectid: 30
group: TBDN-NEG
induration_mm: 0
centre: Taiwan
Extracted molecule
total RNA
Extraction protocol
Standard Qiagen Kit
Label
biotin
Label protocol
NuGEN Ovation WB
Hybridization protocol
NuGEN Ovation WB
Scan protocol
GeneChip(r) Scanner
Data processing
R/Bioconductor; GCRMA
Submission date
Jul 08, 2022
Last update date
Nov 16, 2022
Contact name
Margherita Coccia
E-mail(s)
[email protected]
Organization name
GSK Vaccines
Street address
Rue de l'Institut 89
City
Rixensart
ZIP/Postal code
1330
Country
Belgium
Platform ID
GPL570
Series (1)
GSE197408
Transcriptional signatures to AS01-adjuvanted tuberculosis vaccine in naïve and primed participants
Data table header descriptions
ID_REF
VALUE
GCRMA signal
Data table
ID_REF
VALUE
1007_s_at
6.077443192
1053_at
7.453381455
117_at
7.201875445
121_at
5.251507016
1255_g_at
1.910677384
1294_at
7.474288783
1316_at
5.036046007
1320_at
4.213018455
1405_i_at
10.39936674
1431_at
3.555493951
1438_at
3.912568881
1487_at
6.833584307
1494_f_at
3.311947462
1552256_a_at
3.994230021
1552257_a_at
7.741214039
1552258_at
5.644369949
1552261_at
3.842643983
1552263_at
8.029523917
1552264_a_at
9.108181445
1552266_at
1.877518231
Total number of rows:
54675
Table truncated, full table size
1057 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM6318569_52001900959546121616425017988032.CEL.gz
4.6 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
|
NLM
|
NIH
|
GEO Help
|
Disclaimer
|
Accessibility
|
