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Sample GSM634643 Query DataSets for GSM634643
Status Public on Mar 16, 2011
Title Lonely 5412581031_D
Sample type RNA
 
Source name Peripheral blood mononuclear cells
Organism Homo sapiens
Characteristics lonely: 1
age: 51
female: 1
black: 0
hispanic: 1
married: 0
logincome: 10.76238493
bmi: 28.69387817
granpct: 61
lymphpct: 32
monopct: 6
Extracted molecule total RNA
Extraction protocol Human peripheral blood leukocytes were isolated and total RNA was extracted using Qiagen RNEasy.
Label biotin
Label protocol Standard Illumina beadarray probe synthesis for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
 
Hybridization protocol Standard Illumina beadarray hybridization protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Scan protocol Standard Illumina beadarray scan protocol for gene expression profiling (carried out in UCLA Southern California Genotyping Consortium Core Laboratory).
Description 5412581031_D.AVG_Signal
Data processing Gene expression values derived from Illumina GenomeStudio software.
 
Submission date Dec 03, 2010
Last update date May 07, 2013
Contact name Steve Cole
Organization name UCLA School of Medicine
Department Medicine
Street address 11-934 Factor Bldg, UCLA
City Los Angeles
State/province CA
ZIP/Postal code 90095-1678
Country USA
 
Platform ID GPL6883
Series (1)
GSE25837 Differential gene expression in circulating leukocytes from chronically lonely individuals

Data table header descriptions
ID_REF
VALUE Quantile normalized expression estimates are reported in the Matrix file. Data were subsequently log2-transformed for analysis

Data table
ID_REF VALUE
ILMN_1809034 222.404
ILMN_1660305 1032.092
ILMN_1762337 135.893
ILMN_2055271 168.979
ILMN_1814316 160.157
ILMN_1745607 127.695
ILMN_2136495 122.393
ILMN_2295559 143
ILMN_1735045 144.857
ILMN_1680754 177.025
ILMN_1675204 159.903
ILMN_1755321 270.029
ILMN_1698554 303.909
ILMN_1760414 159.816
ILMN_2061446 444.297
ILMN_1752884 171.467
ILMN_1809959 152.138
ILMN_1689211 161.579
ILMN_1653165 560.994
ILMN_1729835 150.806

Total number of rows: 18630

Table truncated, full table size 383 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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