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Sample GSM635253 Query DataSets for GSM635253
Status Public on Jan 01, 2012
Title estrus stage rep2
Sample type RNA
 
Source name mouse oviduct
Organism Mus musculus
Characteristics strain: ICR
age: 6 weeks
tissue: oviduct
developmental stage: estrus stage
Extracted molecule total RNA
Extraction protocol RNA was extracted, clean-up and DNase I treatment with QIAGEN RNeasy kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 06, 2010
Last update date Jan 01, 2012
Contact name Chung-Hao Lu
E-mail(s) [email protected]
Phone 886-2-28094661-2357
Organization name Mackay Memorial Hospital
Department Department of Medical Research
Lab Reproduction
Street address 92, Sec. 2, Zhongshan N. Rd
City Taipei
State/province Taipei
ZIP/Postal code 10449
Country Taiwan
 
Platform ID GPL6885
Series (1)
GSE25875 Gene expression profiles of the mouse oviduct during the estrous cycle

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 11.24147 0.08646616
ILMN_3122480 -4.543885 0.6716792
ILMN_2599935 166.0283 0
ILMN_2675543 -2.410657 0.5576441
ILMN_2686883 5.430419 0.2255639
ILMN_2751818 6.197602 0.1942356
ILMN_2728634 64.84325 0
ILMN_3040515 4.532955 0.2506266
ILMN_2711608 66.74411 0
ILMN_1232875 0.7975176 0.4022556
ILMN_1258507 7.159085 0.1679198
ILMN_2746142 -12.19205 0.924812
ILMN_1252690 19.91408 0.02631579
ILMN_2655499 6.504664 0.1879699
ILMN_1252870 -1.406294 0.5050125
ILMN_1248179 6.676942 0.1829574
ILMN_2649955 67.11155 0
ILMN_2628708 4.990087 0.2406015
ILMN_3024781 5.380967 0.226817
ILMN_2705628 8.397366 0.1428571

Total number of rows: 25697

Table truncated, full table size 721 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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