NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM635255 Query DataSets for GSM635255
Status Public on Jan 01, 2012
Title diestrus stage rep2
Sample type RNA
 
Source name mouse oviduct
Organism Mus musculus
Characteristics strain: ICR
age: 6 weeks
tissue: oviduct
developmental stage: diestrus stage
Extracted molecule total RNA
Extraction protocol RNA was extracted, clean-up and DNase I treatment with QIAGEN RNeasy kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation with IlluminaGUI in R
 
Submission date Dec 06, 2010
Last update date Jan 01, 2012
Contact name Chung-Hao Lu
E-mail(s) [email protected]
Phone 886-2-28094661-2357
Organization name Mackay Memorial Hospital
Department Department of Medical Research
Lab Reproduction
Street address 92, Sec. 2, Zhongshan N. Rd
City Taipei
State/province Taipei
ZIP/Postal code 10449
Country Taiwan
 
Platform ID GPL6885
Series (1)
GSE25875 Gene expression profiles of the mouse oviduct during the estrous cycle

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1250052 13.95174 0.0651629
ILMN_3122480 -6.267385 0.7894737
ILMN_2599935 141.568 0
ILMN_2675543 0.9186819 0.4310777
ILMN_2686883 -0.2394525 0.4862155
ILMN_2751818 3.416517 0.3283208
ILMN_2728634 64.87032 0
ILMN_3040515 0.4668558 0.4473684
ILMN_2711608 61.79653 0
ILMN_1232875 -1.59297 0.556391
ILMN_1258507 -3.652659 0.6766917
ILMN_2746142 -4.057297 0.6967419
ILMN_1252690 30.60654 0
ILMN_2655499 5.987844 0.2205514
ILMN_1252870 23.06838 0.0112782
ILMN_1248179 -3.057712 0.6378446
ILMN_2649955 75.64074 0
ILMN_2628708 6.362067 0.2042606
ILMN_3024781 6.252193 0.2092732
ILMN_2705628 9.178669 0.1190476

Total number of rows: 25697

Table truncated, full table size 712 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap