NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM647845 Query DataSets for GSM647845
Status Public on Nov 21, 2011
Title 3p_P10_b
Sample type RNA
 
Source name hepatocellular carcinoma cell lines
Organism Homo sapiens
Characteristics cell line: HCC-1.2
passage: 10
Extracted molecule total RNA
Extraction protocol RNeasy Mini kit
Label biotin
Label protocol Affymetrix
 
Hybridization protocol Affymetrix
Scan protocol Affymetrix
Description hepatocellular carcinoma cell lines hcc-1.2 and hcc-1.1 cells, referred to as 3p and 3sp cells, respectively, were isolated from one hcc patient as described ( sagmeister s, eisenbauer m, pirker c, et al. new cellular tools reveal complex epithelial-mesenchymal interactions in hepatocarcinogenesis. br j cancer 2008;99(1): 151-9.). 3p cells of passages 10 to 12 and 3sp cells of passages 7 to 13 are termed 3p early and 3sp early, respectively. 3p cells between passage 71 and 76 and 3sp from passage 72 to 87 were termed 3p late and 3sp late, respectively
Data processing RMA
 
Submission date Jan 03, 2011
Last update date Nov 21, 2011
Contact name Martin Bilban
E-mail(s) [email protected]
Phone ++43 (0)1 40400 6441
Organization name Medical University of Vienna
Department
Street address
City Vienna
ZIP/Postal code 1090
Country Austria
 
Platform ID GPL6244
Series (1)
GSE26391 Comparison of two hepatocellular cancer cell lines with distinct properties regarding epithelial-mesenchymal transition

Data table header descriptions
ID_REF
VALUE RMA log2 signal

Data table
ID_REF VALUE
7896736 4.598414
7896738 1.818582
7896740 2.794864
7896742 6.658229
7896744 4.611658
7896746 6.533049
7896748 5.331202
7896750 2.289991
7896752 8.416156
7896754 5.199704
7896756 3.633877
7896759 5.839926
7896761 6.571011
7896779 6.232251
7896798 6.101067
7896817 6.506371
7896822 8.029156
7896859 4.717498
7896861 3.331161
7896863 4.627542

Total number of rows: 33297

Table truncated, full table size 549 Kbytes.




Supplementary file Size Download File type/resource
GSM647845_3p_P10_b.CEL.gz 3.9 Mb (ftp)(http) CEL
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap