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Sample GSM65124 Query DataSets for GSM65124
Status Public on Mar 20, 2006
Title WT3
Sample type RNA
 
Source name HEK293 cell line
Organism Homo sapiens
Characteristics stably transfected with wild-type surfactant protein C
Extracted molecule total RNA
Extraction protocol accroding to manufacture's protocol (Affymetrix)
Label biotin
Label protocol accroding to manufacture's protocol (Affymetrix)
 
Hybridization protocol accroding to manufacture's protocol (Affymetrix)
Scan protocol accroding to manufacture's protocol (Affymetrix)
Description stably transfected with wild-type surfactant protein C
Data processing RMA normalization, Permutation and ANOVA
 
Submission date Jul 21, 2005
Last update date Jan 20, 2009
Contact name James Patrick Bridges
E-mail(s) [email protected]
Fax 513-636-7868
Organization name Cincinnati Children's Hospital Medical Center
Department Pulmonary Biology
Lab Weaver
Street address 3333 Burnet Avenue
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL96
Series (1)
GSE2980 Constitutive expression of misfolded surfactant protein C

Data table header descriptions
ID_REF
VALUE Affymetrix calculated signal intensity
ABS_CALL Affymetrix detection call
DETECTION P-VALUE Affymetrix calculated detection p-value

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 606 P 0.001593
AFFX-BioB-M_at 918.4 P 0.000169
AFFX-BioB-3_at 322.1 P 0.000446
AFFX-BioC-5_at 1304.9 P 0.00011
AFFX-BioC-3_at 1101.6 P 0.00011
AFFX-BioDn-5_at 1348.6 P 0.000052
AFFX-BioDn-3_at 7898.2 P 0.000127
AFFX-CreX-5_at 15202 P 0.000044
AFFX-CreX-3_at 23957.5 P 0.000044
AFFX-DapX-5_at 50.3 A 0.185131
AFFX-DapX-M_at 31.9 A 0.354453
AFFX-DapX-3_at 46.4 A 0.39692
AFFX-LysX-5_at 29.4 A 0.455413
AFFX-LysX-M_at 5.4 A 0.843268
AFFX-LysX-3_at 19.3 A 0.368438
AFFX-PheX-5_at 4.1 A 0.937071
AFFX-PheX-M_at 6.5 A 0.963431
AFFX-PheX-3_at 50.7 A 0.51489
AFFX-ThrX-5_at 17.1 A 0.772364
AFFX-ThrX-M_at 7.6 A 0.824672

Total number of rows: 22283

Table truncated, full table size 601 Kbytes.




Supplementary file Size Download File type/resource
GSM65124.CEL.gz 3.4 Mb (ftp)(http) CEL

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