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Sample GSM658006 Query DataSets for GSM658006
Status Public on Jul 21, 2011
Title female_restricted_diet_rep3
Sample type RNA
 
Source name female head/thorax, restricted diet
Organism Drosophila melanogaster
Characteristics gender: female
tissue: head/thorax
genetic background: canton-s
diet: restricted
age: 10 days
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from at least 75 females using Trizol (Invitrogen) and further purified using RNeasy columns (QIAGEN). 5 μg total RNA was used with Affymetrix One Cycle DNA conversion Kit (Cat # 900431) and all steps were carried out according to the Affymetrix manual
Label biotin
Label protocol Standard Affymetrix protocol.
 
Hybridization protocol The arrays are hybed overnight (16 hr) at 45C 60 rpm. Fluidics protocol is FS450_0002
Scan protocol Arrays were scanned on a Affymetrix Gene Chip Scanner 3000 7G
Data processing R/Bioconductor, normalized using GCRMA
 
Submission date Jan 19, 2011
Last update date Aug 28, 2018
Contact name Michael Antosh
Organization name Michael Antosh
Street address Brown University Box 1843
City Providence
State/province RI
ZIP/Postal code 02912
Country USA
 
Platform ID GPL1322
Series (1)
GSE26724 Calorie/Dietary Restriction and Resveratrol in Female Drosophila Melanogaster Head/Thorax
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE log2 GCRMA signal

Data table
ID_REF VALUE
1616608_a_at 14.66073127
1622892_s_at 6.51831964
1622893_at 14.29321049
1622894_at 5.333544966
1622895_at 8.493353423
1622896_at 9.623763251
1622897_at 2.128302877
1622898_a_at 9.136808664
1622899_at 2.609507701
1622900_at 2.118652414
1622901_at 2.119424568
1622902_at 11.25438734
1622903_s_at 8.550566051
1622904_at 2.118652414
1622905_at 2.118652414
1622906_at 7.987092919
1622907_at 9.20839212
1622908_a_at 8.552969966
1622909_at 9.771678412
1622910_at 2.118652414

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM658006.CEL.gz 2.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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