NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM66937 Query DataSets for GSM66937
Status Public on Nov 08, 2005
Title 10_95US_5Placenta_HG_U133_Plus_2
Sample type RNA
 
Source name PBMC and Placenta
Organism Homo sapiens
Characteristics Approximately 50 mL whole blood was collected from 30 adult, apparently healthy, volunteers using Acid Citrate Dextrose (ACD) as an anti-coagulant. Samples were processed immediately following blood draw. Cells were isolated by Ficoll gradient centrifugation and total RNA was isolated using Trizol (Invitrogen Life Technologies; Carlsbad, CA) according to manufacturer’s protocol, aliquoted and stored at -80°C until use. Whole placenta was collected and immediately frozen in liquid nitrogen. RNA was extracted using TRI reagent, purified using RNeasy columns (Qiagen; Valencia, CA), aliquoted and stored at -80°C until use. RNA mixtures (100:0, 95:5, 75:25, 50:50, 25:75, 0:100; PBMC: placenta) were prepared in single aliquots.
Extracted molecule total RNA
Label Affymetrix Standard
 
Description Technical labeling replicate of 2_95US_5Placenta_HG_U133_Plus_2 (GSM66938).
Data processing RMA via Bioconductor
 
Submission date Aug 02, 2005
Last update date Aug 28, 2018
Contact name Michael Barnes
E-mail(s) [email protected]
Phone 513-636-1319
Organization name Cincinnati Childrens Hospital Medical Center
Department Rheumatology
Lab Dr. David Glass
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL570
Series (1)
GSE3077 Dillution series comparison of Affymetrix and Illumina Expression Platforms
Relations
Reanalyzed by GSE64985
Reanalyzed by GSE119087

Data table header descriptions
ID_REF
VALUE RMA expression value

Data table
ID_REF VALUE
1007_s_at 7.836322288
1053_at 6.751948754
117_at 7.793133074
121_at 7.237339991
1255_g_at 2.844566426
1294_at 7.841041541
1316_at 5.064516437
1320_at 5.295078879
1405_i_at 11.59588477
1431_at 3.363730534
1438_at 4.975807475
1487_at 7.095364832
1494_f_at 5.129354656
1552256_a_at 7.818389655
1552257_a_at 6.683841589
1552258_at 5.356400495
1552261_at 5.280696547
1552263_at 6.8934477
1552264_a_at 8.792704972
1552266_at 3.584946571

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM66937.CEL.gz 8.0 Mb (ftp)(http) CEL

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap