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Sample GSM674729 Query DataSets for GSM674729
Status Public on Nov 21, 2011
Title Diet B. Biopsy sample collected 3 hours after exercice S2
Sample type RNA
 
Source name vastus lateralis (quadriceps femoris)
Organism Homo sapiens
Characteristics treatment: exercise for 1 h
diet: Diet B - Protein enriched
time: 3 hours after exercise
subject id: S2
tissue: vastus lateralis (quadriceps femoris)
Extracted molecule total RNA
Extraction protocol RNA was extracted with RNAdvance tissue kit from Agencourt (Beckman-Coulter) in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser 2100.
Label biotin
Label protocol Biotinylated cRNA were prepared with the TotalPrep (Ambion) kit for Illumina arrays
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Data processing The data were normalised using quantile normalisation in Genome Studio software
 
Submission date Feb 14, 2011
Last update date Nov 21, 2011
Contact name Frederic Raymond
E-mail(s) [email protected]
Organization name Nestle Institute of Health Sciences
Department Functional Genomics
Street address Campus EPFL - Quartier de l'Innovation
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL6104
Series (1)
GSE27285 Transcriptome and translational signaling following endurance exercise in trained skeletal muscle: impact of dietary protein

Data table header descriptions
ID_REF
VALUE Quantile Normalized
S2 B3.Detection Pval

Data table
ID_REF VALUE S2 B3.Detection Pval
ILMN_1809034 61.09877 0.3502825
ILMN_1660305 68.30462 0.1228814
ILMN_1792173 79.33624 0.02118644
ILMN_1762337 62.69641 0.2768362
ILMN_1736007 60.68433 0.3742938
ILMN_1787689 64.26199 0.2132768
ILMN_1731507 95.39264 0.008474576
ILMN_1814316 245.2929 0
ILMN_1745607 683.1458 0
ILMN_1757454 75.8501 0.02966102
ILMN_1735045 62.7477 0.2754237
ILMN_1680754 89.28797 0.01271186
ILMN_1659452 65.90469 0.1723164
ILMN_1767388 65.45039 0.190678
ILMN_1673870 61.80746 0.3149717
ILMN_1675204 74.693 0.03248588
ILMN_1755321 86.88739 0.01271186
ILMN_1698554 76.74953 0.02824859
ILMN_1805938 60.3154 0.3926554
ILMN_1676336 148.8232 0.001412429

Total number of rows: 22184

Table truncated, full table size 663 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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