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Sample GSM67541 Query DataSets for GSM67541
Status Public on Nov 08, 2005
Title 50US_50P_A_Illumina
Sample type RNA
 
Source name PBMC and Placenta
Organism Homo sapiens
Characteristics Approximately 50 mL whole blood was collected from 30 adult, apparently healthy, volunteers using Acid Citrate Dextrose (ACD) as an anti-coagulant. Samples were processed immediately following blood draw. Cells were isolated by Ficoll gradient centrifugation and total RNA was isolated using Trizol (Invitrogen Life Technologies; Carlsbad, CA) according to manufacturer’s protocol, aliquoted and stored at -80°C until use. Whole placenta was collected and immediately frozen in liquid nitrogen. RNA was extracted using TRI reagent, purified using RNeasy columns (Qiagen; Valencia, CA), aliquoted and stored at -80°C until use. RNA mixtures (100:0, 95:5, 75:25, 50:50, 25:75, 0:100; PBMC: placenta) were prepared in single aliquots.
Extracted molecule total RNA
Label Illumina Standard
 
Description Technical labeling replicate of 50US_50P_B_Illumina (GSM67542).
Data processing Quantile Normalized
 
Submission date Aug 08, 2005
Last update date Aug 09, 2005
Contact name Michael Barnes
E-mail(s) [email protected]
Phone 513-636-1319
Organization name Cincinnati Childrens Hospital Medical Center
Department Rheumatology
Lab Dr. David Glass
Street address 3333 Burnet Ave
City Cincinnati
State/province OH
ZIP/Postal code 45229
Country USA
 
Platform ID GPL2725
Series (1)
GSE3077 Dillution series comparison of Affymetrix and Illumina Expression Platforms

Data table header descriptions
ID_REF
VALUE Expression

Data table
ID_REF VALUE
GI_10047089-S 168.6416667
GI_10047091-S 118.3583333
GI_10047093-S 465.175
GI_10047097-S 1562.291667
GI_10047099-S 1260.933333
GI_10047103-S 2340.791667
GI_10047105-S 192.075
GI_10047115-S 3544.925
GI_10047117-S 695.3666667
GI_10047121-S 116.5583333
GI_10047123-S 484.6166667
GI_10047133-A 191.9583333
GI_10047133-I 160.7916667
GI_10048402-S 108.75
GI_10092578-S 137.4916667
GI_10092585-S 311.625
GI_10092596-S 567.275
GI_10092602-S 156.5416667
GI_10092603-S 153.4166667
GI_10092611-A 449.7166667

Total number of rows: 24136

Table truncated, full table size 570 Kbytes.




Supplementary data files not provided

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