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Sample GSM690642 Query DataSets for GSM690642
Status Public on Sep 24, 2011
Title Antenna 48 hr fasted 5
Sample type RNA
 
Source name Antenna 48 hr fasted 5
Organism Drosophila melanogaster
Characteristics tissue: antenna
time: 48 h
pool: 7
treatment: fasting
Extracted molecule total RNA
Extraction protocol RNEasy Qiagen, amplified with Nugen Ovation® RNA Amplification System V2 (Cat.# 3100-12)
Label biotin
Label protocol Nugen’s FL-Ovation cDNA Biotin Module V2 protocol (Cat.# 4200-12)
 
Hybridization protocol Nugen standard array protocol for cDNA hybridization (Nugen user guide)
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Description antenna dissection
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Mar 14, 2011
Last update date Aug 28, 2018
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL1322
Series (1)
GSE27927 Post-fasting olfactory, transcriptional, and feeding responses in Drosophila
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE GCRMA values in log-2 scale

Data table
ID_REF VALUE
1616608_a_at 12.27004116
1622892_s_at 9.519356645
1622893_at 13.84459538
1622894_at 10.99671007
1622895_at 9.406909616
1622896_at 9.117975479
1622897_at 2.077552566
1622898_a_at 9.34038023
1622899_at 7.872610868
1622900_at 2.077552566
1622901_at 2.077552566
1622902_at 15.31584213
1622903_s_at 10.08181378
1622904_at 2.077552566
1622905_at 2.077552566
1622906_at 11.87165887
1622907_at 12.97662239
1622908_a_at 5.396107444
1622909_at 8.906354815
1622910_at 2.077552566

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM690642_28_A48-7_Drosophila_2.0_Shelli_081908.CEL.gz 2.1 Mb (ftp)(http) CEL
Processed data included within Sample table

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