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Sample GSM690678 Query DataSets for GSM690678
Status Public on Sep 24, 2011
Title Body 0 hr fasted 2
Sample type RNA
 
Source name Body 0 hr fasted 2
Organism Drosophila melanogaster
Characteristics tissue: Body
time: 0 h
pool: 5
treatment: baseline
Extracted molecule total RNA
Extraction protocol RNEasy Qiagen, amplified with Nugen Ovation® RNA Amplification System V2 (Cat.# 3100-12)
Label biotin
Label protocol Nugen’s FL-Ovation cDNA Biotin Module V2 protocol (Cat.# 4200-12)
 
Hybridization protocol Nugen standard array protocol for cDNA hybridization (Nugen user guide)
Scan protocol Hewlett-Packard GeneArray Scanner G25Time: 0Time: 0A.
Description Body missing the head
Data processing GCRMA (using gcrma package from R/Bioconductor)
 
Submission date Mar 14, 2011
Last update date Aug 28, 2018
Contact name Mayte Suarez-Farinas
E-mail(s) [email protected]
Organization name Mount SinaiSchool of Medicine
Street address 1425 Madison Ave, L2-70C, Box 1077,
City New York
State/province NY
ZIP/Postal code 10075
Country USA
 
Platform ID GPL1322
Series (1)
GSE27927 Post-fasting olfactory, transcriptional, and feeding responses in Drosophila
Relations
Reanalyzed by GSE119084

Data table header descriptions
ID_REF
VALUE GCRMA values in log-2 scale

Data table
ID_REF VALUE
1616608_a_at 13.80504275
1622892_s_at 10.01025698
1622893_at 13.79449619
1622894_at 9.885139885
1622895_at 6.848514781
1622896_at 10.39421277
1622897_at 2.077552566
1622898_a_at 9.542028891
1622899_at 4.057666779
1622900_at 2.077552566
1622901_at 8.262804706
1622902_at 2.664613364
1622903_s_at 6.544361899
1622904_at 2.077552566
1622905_at 2.077552566
1622906_at 6.163402091
1622907_at 12.55100935
1622908_a_at 6.899538494
1622909_at 8.018317515
1622910_at 2.077552566

Total number of rows: 18952

Table truncated, full table size 432 Kbytes.




Supplementary file Size Download File type/resource
GSM690678_4_B0-5_Drosophila_2.0_Shelli_092408.CEL.gz 2.2 Mb (ftp)(http) CEL
Processed data included within Sample table

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