|
| Status |
Public on Nov 29, 2011 |
| Title |
Trans_NSD2_rep1 |
| Sample type |
RNA |
| |
|
| Source name |
cell line
|
| Organism |
Mus musculus |
| Characteristics |
cell line: embryonic fibroblasts (derived from p19ARF-/- micderived from p19ARF-/- micee)
tissue: blood
transduction: wild-type NSD2
gender: Female
age: 67
|
| Treatment protocol |
No treatment
|
| Growth protocol |
DMEM supplied with 10% fetal bovine serum
|
| Extracted molecule |
total RNA |
| Extraction protocol |
RNeasy Plus Mini Kit (QIAGEN)
|
| Label |
biotin
|
| Label protocol |
Illumina TotalPrep RNA Amplification Kit (Ambion)
|
| |
|
| Hybridization protocol |
Illumina protocol
|
| Scan protocol |
Illumina protocol
|
| Description |
trans_rep1
Stanford SFGF
|
| Data processing |
Raw data were normalized by rank invariant gene sets and differential genes were identified by dChip software
|
| |
|
| Submission date |
May 09, 2011 |
| Last update date |
Nov 29, 2011 |
| Contact name |
kaifu chen |
| E-mail(s) |
[email protected]
|
| Organization name |
Baylor College of Medicine
|
| Street address |
1 Baylor plaza, suite 450A
|
| City |
Houston |
| ZIP/Postal code |
77030 |
| Country |
USA |
| |
|
| Platform ID |
GPL6885 |
| Series (2) |
| GSE29150 |
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming [Transduction] |
| GSE29305 |
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming |
|
