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Sample GSM724632 Query DataSets for GSM724632
Status Public on Jun 14, 2011
Title MCF10A_miR_221_222_mimic_3
Sample type RNA
 
Source name MCF10A_miR_221_222_mimic
Organism Homo sapiens
Characteristics cell line: MCF10A
treatment: miR-221/222
Treatment protocol Three biological replicates of MCF10A cell lines transfected with either miR-221/222 or miR-control
Extracted molecule total RNA
Extraction protocol total cellular RNA were extracted with mirVanaTM miRNA Isolation Kit (Ambion, Austin, TX).
Label biotin
Label protocol According to the manufacturer’s instruction
 
Hybridization protocol According to the manufacturer’s instruction
Scan protocol According to the manufacturer’s instruction
Data processing Expression was normalized and estimated using RMA (bioconductor package)
 
Submission date May 16, 2011
Last update date Jun 14, 2011
Contact name Peng Yue
E-mail(s) [email protected]
Phone 650-467-3587
Organization name Genentech Inc
Street address 1 DNA Way
City South San Francisco
State/province CA
ZIP/Postal code 94080
Country USA
 
Platform ID GPL570
Series (1)
GSE29327 Gene expression profiling of MCF10A (miR-221/222 vs control)

Data table header descriptions
ID_REF
VALUE log2 RMA signal

Data table
ID_REF VALUE
1007_s_at 11.97173084
1053_at 8.491870732
117_at 7.856578556
121_at 10.48534828
1255_g_at 5.011834105
1294_at 8.73952057
1316_at 7.570017647
1320_at 8.595903616
1405_i_at 4.889596757
1431_at 6.334252402
1438_at 8.900874855
1487_at 11.22162407
1494_f_at 8.334068554
1552256_a_at 10.35717975
1552257_a_at 10.70568879
1552258_at 7.210525809
1552261_at 7.523256243
1552263_at 9.002396573
1552264_a_at 9.981004427
1552266_at 5.360161453

Total number of rows: 54675

Table truncated, full table size 1212 Kbytes.




Supplementary file Size Download File type/resource
GSM724632.CEL.gz 8.9 Mb (ftp)(http) CEL
Processed data included within Sample table

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