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GEO accession:
Sample GSM729640
Query DataSets for GSM729640
Status
Public on May 23, 2012
Title
C10_Normal
Sample type
genomic
Source name
surrounding healthy tissue
Organism
Homo sapiens
Characteristics
disease status: colorectal carcinoma patient
tissue: colon tissue
tissue type: surrounding healthy colonic mucosa
Extracted molecule
genomic DNA
Extraction protocol
Qiagen Puregene Core kit
Label
Cy5 and Cy3
Label protocol
Illumina
Hybridization protocol
Illumina
Scan protocol
Illumina
Data processing
Illumina BeadStudio
Submission date
May 23, 2011
Last update date
May 23, 2012
Contact name
Muhammad Ghulam Kibriya
E-mail(s)
[email protected]
Organization name
The University of Chicago
Department
Health Studies
Street address
900 E 57th Street
City
Chicago
ZIP/Postal code
60637
Country
USA
Platform ID
GPL8490
Series (1)
GSE29490
A Genome-wide DNA Methylation Study in Colorectal Carcinoma
Data table header descriptions
ID_REF
VALUE
normalized Average Beta value
C10_N.Detection Pval
Data table
ID_REF
VALUE
C10_N.Detection Pval
cg00000292
0.8022196
3.68E-38
cg00002426
0.3011345
3.68E-38
cg00003994
0.08713693
3.68E-38
cg00005847
0.5389427
3.68E-38
cg00006414
0.01280935
3.68E-38
cg00007981
0.04783789
3.68E-38
cg00008493
0.9864352
3.68E-38
cg00008713
0.006594667
3.68E-38
cg00009407
0.004154704
3.68E-38
cg00010193
0.7028974
3.68E-38
cg00011459
0.9380229
3.68E-38
cg00012199
0.007873024
3.68E-38
cg00012386
0.0127695
3.68E-38
cg00012792
0.03634614
3.68E-38
cg00013618
0.7409131
3.68E-38
cg00014085
0.006793082
3.68E-38
cg00014837
0.9172528
3.68E-38
cg00015770
0.3768463
3.68E-38
cg00016968
0.6048068
3.68E-38
cg00019495
0.1119586
3.68E-38
Total number of rows:
27578
Table truncated, full table size
810 Kbytes
.
Supplementary data files not provided
Processed data included within Sample table
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