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Sample GSM730673 Query DataSets for GSM730673
Status Public on May 25, 2011
Title CD34+CD45RA+CD10+(CD7-CD19-) donor-2
Sample type RNA
 
Source name CD34+CD45RA+CD10+(CD7-CD19-) HPCs
Organism Homo sapiens
Characteristics tissue: umbilical cord blood
cell type: hematopoietic progenitors
Treatment protocol CD34+ PCs were labelled with CD34, CD45RA, CD7, CD10 and CD19 antibodies before the corresponding population were sorted by FACS
Growth protocol CD34+ HPCs were isolated from Umbilical cord blood midiMACS system (Miltenyi)
Extracted molecule total RNA
Extraction protocol RNA were extracted using the RNeasy Micro Kit
Label biotin
Label protocol RNA samples were subjected to double linear amplification using the GeneChip Eukaryotic Small Sample Target Labeling Assay Version II (Affymetrix).
 
Hybridization protocol cRNAs were then hybridized to Affymetrix HG-U133A GeneChip arrays
Scan protocol GeneChips were scanned using the Agilent GeneArray Scanner 2500A
Description Galy2
Gene expression data from pre-proB cells
Data processing The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
 
Submission date May 25, 2011
Last update date May 25, 2011
Contact name Marc Delord
E-mail(s) [email protected]
Organization name Centre hospitalier de Versailles
Department Recherche clinique
Street address Hopital Saint-Louis, 1 avenue Claude Vellefaux
City Paris
ZIP/Postal code 75010
Country France
 
Platform ID GPL96
Series (1)
GSE29522 Expression data from human CD34+ HPC subpopulations isolated from umbilical cord blood (Haddad et al. Blood 104:3918, 2004)

Data table header descriptions
ID_REF
VALUE MAS5.0 signal intensity
Detection
Detection p-value

Data table
ID_REF VALUE Detection Detection p-value
1007_s_at 268.3 P 0.002617
1053_at 25.4 A 0.066865
117_at 32.5 A 0.107301
121_at 170.8 P 0.004180
1255_g_at 2.2 A 0.679170
1294_at 488.5 P 0.000388
1316_at 37.5 P 0.002228
1320_at 3.5 A 0.732537
1405_i_at 3.1 A 0.586954
1431_at 24.2 M 0.054470
1438_at 3.9 A 0.765443
1487_at 80.5 M 0.060419
1494_f_at 42.3 A 0.175989
1598_g_at 67.3 A 0.117160
160020_at 79.7 P 0.019304
1729_at 84.9 P 0.017001
177_at 26.1 A 0.089405
1773_at 13.7 A 0.479380
179_at 106.3 A 0.127645
1861_at 2.9 A 0.621816

Total number of rows: 22283

Table truncated, full table size 582 Kbytes.




Supplementary file Size Download File type/resource
GSM730673.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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